Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0657 ATGAAGTTATGCGCTTCACTGTTGTTTCTCAGTTTAATTTCCATGGTCTCTTTCGCGACTTGTGATACTGTGCCCTCAAATGAAGTTTGGGCGCTAACAACCTCTAAAGAAGCTGTATATGAAGACCCATACCTAGTTCTGTCCAACTGGAATACGCTTGATTCAGATCCTTGTGAATGGTTTGGCGTTTCTTGCACTAAAGATCGAGATCATATCATTAAGCTAAATATCACGGGGTCATCATTAAGAGGATTTCTAGCGCCAGAATTGGGACAAATCACCTTCTTGCAAGAACTGGTTTTGCATGACAACAATCTGATTGGAACAATACCTAAAGAATTGTTCACGTTGAATTCCCTCAAGGTCTTGGATTTGGGGAAGAATCAGTTATCTGGACCAATTCCTCCAGAGATTGGGAATCTAGCTGAAGTTGTTAAAATAATCCTGCAGTCCAATGGGTTGACTGGGAGGCTACCTCCAGCACTTGGAAATTTGAGATACCTTCAGGAACTTAGGCTGGACAGGAATAAACTTCAAGGACCAGTTCCTGCTGGTAGCAGTTCAAGCATTTCTCCAAATACGCGTGGAATGTATGCCTCAAATGCAAATTTAACTGGTCTCTGTCGGTCACCTCAGTTAAAAGTTGCAGATTTTTCATATAACTTCTTTGTAGGTAGCATACCCGCTTGCTTGTTGGAGTATCTACCTAGGTCTAGCTTTCAAGGGAACTGCTTCCAAAGCAATGAATTAAAGCAGCGTTCCTCATTGCAATGTGCTGGTGCTTCACCTGCCAAGAGCCGTTCTCTGGCCAATCCAAAGCATCGACCTGCTGAATATGTGGCCAAGCATCATAAAGCATCCCAACCTGCCTGGCTTTTGGCTCTAGAAATAGCGACAGGAACCTTGGTTGGTTCTATTTTTCTGGTTGCACTTCTCGCTGCTTTTCTTAAATGTGACAACAAAGCATCTATCATTTGGCCTTGGAAGAAATATGCAAGCAGGAAGGACCATATGACAGTATATATAGACTCTGAGATGCTGAAGGATGTGAGGAGTTTCAGCAGACAAGAGCTTGAAGTGGCATGTGAAGACTTCAGCAACATTATTGGGTCCTCACCAGATAGTGTAGTCTACAAGGGCACCATGAAAGGTGGGCCTGAGATTGCTGTAATTTCTCTCTGCATGAAGGAGGAGCATTGGACAGGATATCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGACTAAATCATGAGAACACTGGAAAACTTCTGGGATATTGTAGAGCGAGCTCTCCATTTACAAGGATGCTGATTTTTGAGTATGCTTCAAATGGAACACTCCATGAGTACTTACATTATGGAGAAGGGAGCCAGTTATCATGGACACGGCGTATGAAAATCATTATTGGCATTGCGCATGGACTGAAGTATCTGCACACAGAAGTTGACCCTCCATTCACTATATCAGAGCTGAATTCTAATGCTGTATACCTTACGGAAGATTTTGCCCCTACGCTAGTTGATTTTGAGAGCTGGAAGACAATAATTGAAAGGTCAGAAAAGAACTCTGAATCTGTTGGAAGCCAAGGTGCTGTTTGTGTTCTTCCTCAATCTCTCGAGGCACGCCATCACGATCCCCAGGCAAATGTACATGCATTTGGCATACTTCTGCTGGAGATAATAAGTGGGAGACCTCCATATTGCAAGAGCAAAGGCTCCTTGGTAGATTGGGCCAAGGAGTATCTAGAAATGCCAGAGGTAATGTCATATGTGGTGGATCCAGAGTTGAAACATTTCAGATACGAGGACCTCGCAGTAATATGCGAGGTAGTAAATCTCTGTATCAATCCAGACCCCACCAAGCGACTATCGATGACGGAAATATGCAGTATGCTGGAGAGCAGGATTGACACATCGATGAGTGTGGAGTTCAAGTCTTCATCTTTGGCTTGGGCTGAACTTGCACTTTCATCATAG 1986 0.4361 MKLCASLLFLSLISMVSFATCDTVPSNEVWALTTSKEAVYEDPYLVLSNWNTLDSDPCEWFGVSCTKDRDHIIKLNITGSSLRGFLAPELGQITFLQELVLHDNNLIGTIPKELFTLNSLKVLDLGKNQLSGPIPPEIGNLAEVVKIILQSNGLTGRLPPALGNLRYLQELRLDRNKLQGPVPAGSSSSISPNTRGMYASNANLTGLCRSPQLKVADFSYNFFVGSIPACLLEYLPRSSFQGNCFQSNELKQRSSLQCAGASPAKSRSLANPKHRPAEYVAKHHKASQPAWLLALEIATGTLVGSIFLVALLAAFLKCDNKASIIWPWKKYASRKDHMTVYIDSEMLKDVRSFSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCMKEEHWTGYLELYFQREVADLARLNHENTGKLLGYCRASSPFTRMLIFEYASNGTLHEYLHYGEGSQLSWTRRMKIIIGIAHGLKYLHTEVDPPFTISELNSNAVYLTEDFAPTLVDFESWKTIIERSEKNSESVGSQGAVCVLPQSLEARHHDPQANVHAFGILLLEIISGRPPYCKSKGSLVDWAKEYLEMPEVMSYVVDPELKHFRYEDLAVICEVVNLCINPDPTKRLSMTEICSMLESRIDTSMSVEFKSSSLAWAELALSS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0657 661 SUPERFAMILY Protein kinase-like (PK-like) 338 636 IPR011009 -
Lele50g0657 661 Gene3D Ribonuclease Inhibitor 28 142 IPR032675 -
Lele50g0657 661 Gene3D Ribonuclease Inhibitor 143 243 IPR032675 -
Lele50g0657 661 PANTHER PROTEIN MALE DISCOVERER 2 15 659 - -
Lele50g0657 661 FunFam Inactive receptor-like serine/threonine-protein kinase 337 444 - -
Lele50g0657 661 ProSiteProfiles Protein kinase domain profile. 363 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0657 661 SUPERFAMILY L domain-like 29 231 - -
Lele50g0657 661 Gene3D Phosphorylase Kinase; domain 1 337 444 - -
Lele50g0657 661 Pfam Leucine rich repeat 96 154 IPR001611 GO:0005515
Lele50g0657 661 Pfam Protein tyrosine and serine/threonine kinase 367 635 IPR001245 GO:0004672|GO:0006468
Lele50g0657 661 Pfam Leucine rich repeat N-terminal domain 30 65 IPR013210 -
Lele50g0657 661 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 25 181 - -
Lele50g0657 661 Gene3D Transferase(Phosphotransferase) domain 1 445 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0657 Lele-ChrLele50 4030851 4034514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0657 41 640 Receptor kinase-like Gene Family AT5G45780 28.548 2.18e-56 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lele50g0657 PK_Tyr_Ser-Thr 1.2e-20 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0657 50 4030851 4034514 Lele51g0648 51 3918484 3922043 hybridization
Lele50g0657 50 4030851 4034514 Lele52g0649 52 4119058 4122710 hybridization