Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0653 ATGGATGCCATCTGTTATATTTGTGGAAAAGTTGATGAAACATTAGAGCACTGCTTATTGCTTTGTGAATGGACTAGAAGGATCTGGTATGGTTCTAGCTTGAATTTTTGGATTGAAGCAAAATCTATTACAAGGTTTGATGAATGGTTATGGAAGGTATTTGATGGTAAGAATGGTATGGGAGATTATCAAAAGGCAGTGGCTCTGGCTGTAAGAAAGTCTGTAGAAATGATGAAGCAAAGTGGCGATGGTCAATATGTATTTGAGACTGATTGTGCAACTCTGTATGAAATGCTGAACACATCGCAGATCATTGTTGCTACTCCAGGTAGGTTGCTGGATCATATTGAGTATAAGTCTGGAATATCTCTGTGGTTGATGGGTTTGCAGATGCTCATACTTGACGAAGCTGATCATTTATTGGACCTGGGCTTTCGAAAGAGTGTAGAAAAGCTTGTTGATTGTTTGCCCCGTCAAAGGCAATCCTTGCTATTTTCTGCAACCATTCCAAAGGAGGTCCGACGTATATCTCAACTTGTTTTGAAAAGAGATCACACATATATTGACACAGTGGGGATAAATTGTGTGGAAACTCCTGTTAAACATATCTTGCAAGAACCTGATTATAAGGTTATTGTTTTCTGCATAACTAGTATGGTGACTTCACTCTTGTATCAGCTTCTTCGGGAAATGAATGTTAGGGAGATACATTCCCGAAAACCTCAACTTTATCGAACTCGCATATCGGATGAGTTCAGGGAATCCAAACAACTGATTCTTATCTAG 786 0.3906 MDAICYICGKVDETLEHCLLLCEWTRRIWYGSSLNFWIEAKSITRFDEWLWKVFDGKNGMGDYQKAVALAVRKSVEMMKQSGDGQYVFETDCATLYEMLNTSQIIVATPGRLLDHIEYKSGISLWLMGLQMLILDEADHLLDLGFRKSVEKLVDCLPRQRQSLLFSATIPKEVRRISQLVLKRDHTYIDTVGINCVETPVKHILQEPDYKVIVFCITSMVTSLLYQLLREMNVREIHSRKPQLYRTRISDEFRESKQLILI 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0653 261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 261 IPR027417 -
Lele50g0653 261 PANTHER RNA HELICASE 99 260 - -
Lele50g0653 261 Pfam DEAD/DEAH box helicase 97 175 IPR011545 GO:0003676|GO:0005524
Lele50g0653 261 Gene3D - 193 261 IPR027417 -
Lele50g0653 261 Gene3D - 63 189 IPR027417 -
Lele50g0653 261 SMART ultradead3 10 203 IPR014001 -
Lele50g0653 261 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 103 187 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0653 Lele-ChrLele50 3997445 3999150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0653 103 261 Eukaryotic Initiation Factors Gene Family AT3G19760 27.778 2.78e-11 61.2