Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0644 ATGGGTAAGGTATCAAAATGGTTTCGTGGTCTTCTTAATCTTAAAAAGCCCGATTGCTCATCTCACACTCCCACCACCTCTGTTCCAAAACCACCCAAAGAGAAACGCAGATGGAGCTTCGTCAAATCTTACAGACAAAACGATAACCTCCCTACCATCGCCACTGTTAAAACCGGCATTCATCACAATAATGACAGTCATACGATCGCCATGACTGCCGCCTCTGCACGTAGACTTCGTAGCGGCGTCGGATGCGTCCGAGCCACGGTGGAGAGCACCGCTAACCGTGAAGAATGGGCAGCCGTTAAGATTCAAGCCACTTTTCGAGGCTTTTTGGCAGGAAGAGCCCTGCGAGCGCTGAAAGGATTAGTAAAGCTGCAGGCATTGGTGAGAGGTCAGTTGGAGAGGAAGCGGACGGCTAAGTTGCTGCAAAAAATGCAATTACTCTTACGAGCTCAGGCTCCAGTTCAGGCGGGGCGGCTTAAGTCATCTTTGATCGCTAAGTCATCAAATATCCACCTCCATGGTCCGGCAACACCTGATAAAGTTGAAAACCCCATCCGATCCAAGAGCATGAAATATGATCAACCATCAATACTCAAGATCAGGGGCAATAAGGAGAAATGTTGGAAGACAACAGACAGTTGGGTAGACGAGAAATCATGGAATCGACAAAGATCGTCCGTAAAAACCTGCGTGGACGAGGAAAGAAATGTAAGGATCCTGGAAATGGATTCTGAAAAGAGAAACTTCGCACCAAAACGCAGAGCCAGAAACCTCTTCCACTCCGCTAATCTTGCTTTAGTTTCTGATCCTTATAGTCAGACTTTGACGACCACCATAAAGAACTCAACAATTCATCATTCCGGCCCAATCCATCGTGGAGTTCATCAATCTTACAGCCCACCAGAAGGACATGAAGTTGATGGGACCCCATTCTGCACAGCAAACACTAGTCCTCAGTTTTTGTCTGGGTCCTCTAGGGATGGTAGCTCTAAAAGAAGCCCTTTTACTCCTAGTAGGAGTGATGGTTCAAGAAGCTATGTAAGTGCTTATTCTGACTGCCCAAATTATATGGCTTATACAGAATCTTCCAAGGCAAAAGTCAGATCTCTGAGTGCTCCAAAACAGAGGACAAGATATGAGAGGTCTGGTTCGTCTAATAGGTACACGATGAACGGATTTGGTGAGTCAAGATTCGGTACACAGAAGGCATCTGATTTGCATGCAAGCTTCACTACCAAAGCCTATCCAGGTTCTGGTCGTTTGGATAAGTCTGGTTTGCCCATGGGTGGCAGATACTGA 1305 0.4659 MGKVSKWFRGLLNLKKPDCSSHTPTTSVPKPPKEKRRWSFVKSYRQNDNLPTIATVKTGIHHNNDSHTIAMTAASARRLRSGVGCVRATVESTANREEWAAVKIQATFRGFLAGRALRALKGLVKLQALVRGQLERKRTAKLLQKMQLLLRAQAPVQAGRLKSSLIAKSSNIHLHGPATPDKVENPIRSKSMKYDQPSILKIRGNKEKCWKTTDSWVDEKSWNRQRSSVKTCVDEERNVRILEMDSEKRNFAPKRRARNLFHSANLALVSDPYSQTLTTTIKNSTIHHSGPIHRGVHQSYSPPEGHEVDGTPFCTANTSPQFLSGSSRDGSSKRSPFTPSRSDGSRSYVSAYSDCPNYMAYTESSKAKVRSLSAPKQRTRYERSGSSNRYTMNGFGESRFGTQKASDLHASFTTKAYPGSGRLDKSGLPMGGRY 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0644 434 MobiDBLite consensus disorder prediction 369 392 - -
Lele50g0644 434 PANTHER IQ-DOMAIN 5-RELATED 1 388 - -
Lele50g0644 434 ProSiteProfiles IQ motif profile. 97 125 IPR000048 GO:0005515
Lele50g0644 434 Pfam IQ calmodulin-binding motif 99 117 IPR000048 GO:0005515
Lele50g0644 434 ProSiteProfiles IQ motif profile. 121 147 IPR000048 GO:0005515
Lele50g0644 434 MobiDBLite consensus disorder prediction 312 348 - -
Lele50g0644 434 Gene3D - 94 148 - -
Lele50g0644 434 MobiDBLite consensus disorder prediction 285 348 - -
Lele50g0644 434 Pfam Protein of unknown function (DUF4005) 319 384 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0644 Lele-ChrLele50 3954365 3957260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0644 1 51 IQD Protein Family AT4G23060 48.214 4.75e-07 50.1