Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0637 ATGGCGTCGTGTTCTTCTTCTTCCAAGAGCAAGAGGCACCCACTGTACCATGGGATTCGCTGCCGTGGTGGAAAATGGGTGTCTGAAATCCGGGAGCCACGTAAGGATTCTCGCATATGGCTCGGCACGTTCAAGACGCCAGAGATGGCTGCCGCGGCCTATGACGTGGCAGCATTAGCCCTCAAAGGCGGCGATGCAGTCCTCAACTTCCCCGACTGGGTCGGGACTTTTCCGGTGCCGGCTTCTTCATCTGCTGCTGACATTCGTAGCGCAGCCGCAGCCGCAGCCGAACTCATGGCGCCTCAAGAACAGACTCAAATCAATGACGATGACGCTGCTAATTTTAATCATGGGAATGAGAGCAATGTTTCGCGGGCTGAAACAAATGATTTTGTGGACGAGGAAGCCATATTCGGCATGCCAAATTTGCTGGTGGACATGGCTGGAGGAATGCTGCTCTCTCCTCCCAGAATGGACCCACCACCGTCGGATAACTCTCCGGACGACGAGAGGTCGTACGGAGGAGGAACATTGTGGAACTATTTTTGA 549 0.5428 MASCSSSSKSKRHPLYHGIRCRGGKWVSEIREPRKDSRIWLGTFKTPEMAAAAYDVAALALKGGDAVLNFPDWVGTFPVPASSSAADIRSAAAAAAELMAPQEQTQINDDDAANFNHGNESNVSRAETNDFVDEEAIFGMPNLLVDMAGGMLLSPPRMDPPPSDNSPDDERSYGGGTLWNYF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0637 182 SMART rav1_2 15 77 IPR001471 GO:0003700|GO:0006355
Lele50g0637 182 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 9 181 IPR045277 GO:0003700
Lele50g0637 182 Gene3D AP2/ERF domain 15 72 IPR036955 GO:0003700|GO:0006355
Lele50g0637 182 CDD AP2 14 72 IPR001471 GO:0003700|GO:0006355
Lele50g0637 182 MobiDBLite consensus disorder prediction 152 176 - -
Lele50g0637 182 SUPERFAMILY DNA-binding domain 15 72 IPR016177 GO:0003677
Lele50g0637 182 Pfam AP2 domain 16 63 IPR001471 GO:0003700|GO:0006355
Lele50g0637 182 ProSiteProfiles AP2/ERF domain profile. 15 71 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0637 Lele-ChrLele50 3901583 3902131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0637 2 181 AP2-EREBP Transcription Factor Family AT5G52020 51.337 4.43e-47 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele50g0637 AP2 3.5e-09 CL0081