Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0636 ATGAACTTTTTCAGAACTGTCACAAGTAACTCAGAGTCTTCTCACTCCGACGAAGAAGCGATCACATTAGCGTCGGAGAAACCGAAGAAGAGAGCCGGGCGTAGGGTGTTTAAGGAGACAAGACATCCTGTGTACCGAGGAGTTCGTCGCCGGGACAACGACAAGTGGGTCTGCGAGGTTCGTGTTCCTAATAATAACAAATTAAGGATCTGGCTTGGAACTCATTCGACTCCTGAGAAAGCCGCCAGAGCACACGATGTTGCTGCTCTCGCACTTCGTGGTAAGTCGGCTTGTCTCAATTTTGCAGACTCCGCGCGGCTTCCTGTGCCGGCGTCCACCGATCCCGACGAGATACGCCGAGTGGTGATAGAGACGTTGGAGGCATTTGACGATGACGAAGTGTATTGTAGCAGTATGGGGACAATGGGATCATTGGAAGAAGCTAACGTTGGTATGAGTGTTGAAGTGGGGGTTTCAGAGTTTGAAGATGATCGGGTTTTGTTTAGCTTGGCGGATGAGCCGTTGAGGTCTCCGCCGGTGGCTTATTCTCTGGGAACACACGGGTGGGACTGGAGAGACGAAGTGGACCAGGTGGATACTGAGGTGTCACTTTGGAGCTTTACCGTTGATTGA 633 0.5134 MNFFRTVTSNSESSHSDEEAITLASEKPKKRAGRRVFKETRHPVYRGVRRRDNDKWVCEVRVPNNNKLRIWLGTHSTPEKAARAHDVAALALRGKSACLNFADSARLPVPASTDPDEIRRVVIETLEAFDDDEVYCSSMGTMGSLEEANVGMSVEVGVSEFEDDRVLFSLADEPLRSPPVAYSLGTHGWDWRDEVDQVDTEVSLWSFTVD 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0636 210 ProSiteProfiles AP2/ERF domain profile. 44 102 IPR001471 GO:0003700|GO:0006355
Lele50g0636 210 CDD AP2 45 104 IPR001471 GO:0003700|GO:0006355
Lele50g0636 210 Gene3D AP2/ERF domain 44 103 IPR036955 GO:0003700|GO:0006355
Lele50g0636 210 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 9 206 IPR045277 GO:0003700
Lele50g0636 210 Pfam AP2 domain 43 94 IPR001471 GO:0003700|GO:0006355
Lele50g0636 210 SUPERFAMILY DNA-binding domain 44 104 IPR016177 GO:0003677
Lele50g0636 210 MobiDBLite consensus disorder prediction 1 18 - -
Lele50g0636 210 MobiDBLite consensus disorder prediction 1 21 - -
Lele50g0636 210 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Lele50g0636 210 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Lele50g0636 210 SMART rav1_2 44 108 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0636 Lele-ChrLele50 3895146 3895778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0636 21 207 AP2-EREBP Transcription Factor Family AT1G63030 53.886 6.01e-58 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele50g0636 AP2 9.1e-13 CL0081