Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0629 ATGGATCAAGACGACGAGGGCGGAACCTCCGACCTCAGCACCAGCGCCGGCGATCCTGTGGCCATCAACACCGAAAAAAACAGTGGACTTTCGAAAGAGCCTGTCTTGGACGGTCCCATGGCTTTCCAGGTCTTGCCGTTGAAGGAGGAGCCCGTTGATTCGGATGCGCCGTCAGACCAGGAACAAAAGACGCAGCCTTCTTCGTCGGCTCCGATTGGAGACGTTCCCGTCGAGATGCAGATGCAAATGCCCCTAACTATACCCATGCCCATGCCTATCGCCACCGCGAGACGCTCCTCCACCAAGGACCGCCACACGAAGGTGGAAGGCCGTGGACGTAGGATCCGAATACCCGCCACTTGCGCGGCTCGGATCTTTCAGCTGACTCGGGAGTTAGGTCATAAGTCTGATGGCGAAACCGTGCGGTGGCTCCTCGAACACGCGGAGCAGGCCATCATCGAGGCCACCGGCACAGGCACCGTCCCAGCCATCGCTGTCTCCGTCGGGGGAGCTCTGAAGATTCCTACAACGTCTAGCGCCAACAGCAATCAGGACTCCGAACTCAGGAAGAAGCGGAACAGGCCGTCGAATAGTGAGTTTCTTGACGTGAGTGAAGCCGTTTCACAATCGTCCGGTTTGGCCCCGGTTCAATCGGCTCTTCCACAAGGCCTCGTGCCTGTATGGGCAGTGGGCAACACGAATATGATGATCCCAGCAAACGCCTTTTGGATGATCCCTCCGGCGGCGCCCGTGGGTGGAAGTCCGGGATCGTCAATCCAACAACCTCGAATATGGACTCTATCGCCGACGGTGACGCCCGTATTCAACGTATCAGCCAGACCCGTATCGTCTTTGGTGGCAGCAACAACAAATCGCACGGGCGGCATAGAAGTCCAGCCAGTGGGATGCAACAATTCGTTCAACACAGCAGCGGTGAGCACGAGCACGGTGGGGCCAACGGCGGCAAAGAAATCGACGATGGCACCGAGCGTTAGTGGAAGCGGGGCGACGGGAAGTAGTAGTAGCAGCGGCAGCAAGGCGCAGATGTTGAGGGACTTTTCATTGGAGATTTACGATAAGCGAGAGTTGCCGCTGATGGGGCGGTCAGGGAATAATAAACAAGCGTAA 1128 0.5754 MDQDDEGGTSDLSTSAGDPVAINTEKNSGLSKEPVLDGPMAFQVLPLKEEPVDSDAPSDQEQKTQPSSSAPIGDVPVEMQMQMPLTIPMPMPIATARRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVGGALKIPTTSSANSNQDSELRKKRNRPSNSEFLDVSEAVSQSSGLAPVQSALPQGLVPVWAVGNTNMMIPANAFWMIPPAAPVGGSPGSSIQQPRIWTLSPTVTPVFNVSARPVSSLVAATTNRTGGIEVQPVGCNNSFNTAAVSTSTVGPTAAKKSTMAPSVSGSGATGSSSSSGSKAQMLRDFSLEIYDKRELPLMGRSGNNKQA 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0629 375 ProSiteProfiles TCP domain profile. 101 155 IPR017887 -
Lele50g0629 375 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 58 362 IPR005333 GO:0003700
Lele50g0629 375 MobiDBLite consensus disorder prediction 176 198 - -
Lele50g0629 375 MobiDBLite consensus disorder prediction 316 347 - -
Lele50g0629 375 Pfam TCP family transcription factor 100 187 IPR017887 -
Lele50g0629 375 MobiDBLite consensus disorder prediction 1 75 - -
Lele50g0629 375 MobiDBLite consensus disorder prediction 8 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0629 Lele-ChrLele50 3828082 3829209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0629 97 363 TCP Transcription Factor Family AT2G45680 49.827 2.45e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele50g0629 TCP 1.7e-28 No_clan