Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0607 ATGTTATCATCGAGCATGAGAAGGCATCGTCAATTTCATCTCCAGCATGCTCTCTTGTGCTCTGTTCTCTGTCTTCTTTCATCTATCACGGTGTTGCCGGTGACTGAGAAGGAGATTTTGCTTCAATTTAAGGGTAACATTACAGATGATCCTCAAAACAGCTTGAGCTCATGGGTTTCGAGTGGAAACCCTTGTGAAGATTATAGGGGAGTCTTCTGTAACTCCGAAGGTTTTGTGGAAAGAATCGTGCTATGGAACACTAGTTTGGGCGGAGTATTGGCGCCGGCTCTGTCGGGGTTGAAGAGTTTGAGGATTTTGACACTGTTCGGGAATCGATTTTCGGGGAAGATTCCGGAAGAATACGGTGACATTCACTCATTGTGGAAGATCAATTTGAGCTCCAATGCATTATCTGGTTCCATCCCAGAGTTCATTGGTGACTTAGAAAGTATCCGCTTTCTGGATTTATCCAAGAATGGCTTCACTGGGGAGATTCCTTCGGCTTTGTTTAGGCACTGTTACAAAACCAGGTTCATTTCTCTTTCTCATAACGATCTTTCAGGTATAATTCCGGCGTCATTGGCGAATTGCTCGAACCTCGAAGGTTTTGATTTTTCTTTCAACAATCTAAGAGGGGGTATTCCTTCTGGACTTTTTGGCATTCCTAGATTATCCTACATGTCCTTGAGAAGCAATGTCTTATCAGGAACAGTGAAACAGCAGATTGTGGGATGCCAGAGCTTGACACTTTTGGATCTCGGAGATAATACATTCACTGGTTCAGCCCCTTTTAGCATCATCGAAACCAAGGATCTCACTTATTTCAATGTATCACATAACGGTTTTAGTGGACAAATTCCTGAGATCACTGCCTGTAGTGAGAGATTACAATTTTTTGATGCTTCAGGGAATGCTTTGGGTGGAGAGATTCCTTCTAGTATAACAGCATGCAAGAACCTCAAGCTATTGGCCTTGGAGTCTAATAGGTTGAAAGGGACAATCCCGTTAGGGATTAAGGATATGGGAAGTCTACTAGTTATTAAATTAGGTAATAATTCAGTGAGTGGATCGATTCCCAAGGGATTTGGCAACATTCAGCTGCTTGAAGTCCTTGATTTGCATAATCTAAACCTCGTCGGTGAAATTCCCAAAGATATAAGCAATTGTAGATTCCTTCTAGAGCTGAATGTTTCTGGTAATGACTTAGAAGGAGAGATTCCTCAGAACCTTAACAACTTAACATATCTGGAAGTTCTTGACCTGCATCAAAATCAGCTCAATGGCAGCATCCCAACAAGCGTAGGAAACTTGTCAAAGATCCAATACCTGGATTTGTCACACAATTCACTTTCTGGTTCTATCCCTTTTTCGCTTGGGAATTTGAACAAACTGACAATTTTTAATCTCTCATTTAACAATCTCTCTGGTGTCATTCCAACTATTGCATCGATACAGAGTTTCGGTTCTTCAGCATTTTCCAACAATCCTTATCTTTGTGGTCTTCCTTTGGACACCCCTTGCTCAGCAATTGGCACTACCACACAACCTACTTCTAGGAAACCTAAATTAAGTGTCTCTGCAATTATTGCAATTGTTGCTGCAGCAGTGATTCTTATTGGGGTTTGTTTGGTGAGCATCATGAATATCAAGGCCCGTAGCAAGAAAAAAGATGAACAGATGATGATTGTTGAGAGTACACCCCTTGGATCCACAGAATCAAATGTTATAATAGGAAAGCTGGTTCTCTTCAGCAAAAGTTTACCATCCAAGTATGAAGACTGGGAGGCAGGTACGAAAGCTTTGCTTGATAAAGAGTCTATGATCGGGCACGGATCGATTGGGACAGTCTACAGAACTGATTTTGAAGGTGGGATCTCAATTGCAGTGAAAAAGCTTGAGACTTTGGGAAGAATCCGAAACCAGGATGAATTCGAGCATGAAATCGGGAGAATAAGTAACCTTCGACACCCTAATTTAGTTGCCTTTCAAGGTTACTATTGGTCCTCGACAATGCAGTTGATTCTATCAGAGTTTGTCTCAAATGGGAATCTCTACGATAATCTACACGGCTTCGGCTATCCCGGAACTAGCACCAGCCGTGGCAACCGGGAAATAAACTGGTCTAGAAGGTACCAAATTGCAGTTGGAACTGCAAGAGCCCTTGCCTACCTTCACCATGACTGTCAACCTCCAATTCTTCATCTCAACATAAAGTCCTCAAACATACTCTTAGATGACAAGTATGAGGCAAAATTGTGTGATTATGGGTTGGGGAAGTTACTTCCCATTTTGGACAATTACGGTTTGACCAAATTCCATAATTCCGTTGGGTATGTTGCACCAGAATTGGCTCAGAGTATGAGGCAGAGTGAGAAATGTGACGTGTATAGTTTTGGGGTTATTCTTTTGGAGTTGGTCACAGGGAGGAAGCCTGTAGAAAGTCCGACAGCGAGCGAGGTTGTGGTTTTGTGTGAATATGTAAGAGGACTTTTGGAGACTGGTTCTGCTTCACTATGCTTTGATACGAGGTTGCTGGGTTTTGCGGAGAACGAGTTAATTCAGGTGATGAGATTGGGTCTTATTTGTACGTCGGAGGATCCTTCAAGGAGACCAAGCATGGCTGAGGTTGTGCAGGTTCTTGAATCTATCAGAAATGGATTGGAATCAAATTAA 2673 0.4227 MLSSSMRRHRQFHLQHALLCSVLCLLSSITVLPVTEKEILLQFKGNITDDPQNSLSSWVSSGNPCEDYRGVFCNSEGFVERIVLWNTSLGGVLAPALSGLKSLRILTLFGNRFSGKIPEEYGDIHSLWKINLSSNALSGSIPEFIGDLESIRFLDLSKNGFTGEIPSALFRHCYKTRFISLSHNDLSGIIPASLANCSNLEGFDFSFNNLRGGIPSGLFGIPRLSYMSLRSNVLSGTVKQQIVGCQSLTLLDLGDNTFTGSAPFSIIETKDLTYFNVSHNGFSGQIPEITACSERLQFFDASGNALGGEIPSSITACKNLKLLALESNRLKGTIPLGIKDMGSLLVIKLGNNSVSGSIPKGFGNIQLLEVLDLHNLNLVGEIPKDISNCRFLLELNVSGNDLEGEIPQNLNNLTYLEVLDLHQNQLNGSIPTSVGNLSKIQYLDLSHNSLSGSIPFSLGNLNKLTIFNLSFNNLSGVIPTIASIQSFGSSAFSNNPYLCGLPLDTPCSAIGTTTQPTSRKPKLSVSAIIAIVAAAVILIGVCLVSIMNIKARSKKKDEQMMIVESTPLGSTESNVIIGKLVLFSKSLPSKYEDWEAGTKALLDKESMIGHGSIGTVYRTDFEGGISIAVKKLETLGRIRNQDEFEHEIGRISNLRHPNLVAFQGYYWSSTMQLILSEFVSNGNLYDNLHGFGYPGTSTSRGNREINWSRRYQIAVGTARALAYLHHDCQPPILHLNIKSSNILLDDKYEAKLCDYGLGKLLPILDNYGLTKFHNSVGYVAPELAQSMRQSEKCDVYSFGVILLELVTGRKPVESPTASEVVVLCEYVRGLLETGSASLCFDTRLLGFAENELIQVMRLGLICTSEDPSRRPSMAEVVQVLESIRNGLESN 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0607 890 SUPERFAMILY L domain-like 173 499 - -
Lele50g0607 890 FunFam Putative LRR receptor-like serine/threonine-protein kinase 680 887 - -
Lele50g0607 890 Gene3D Phosphorylase Kinase; domain 1 583 679 - -
Lele50g0607 890 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
Lele50g0607 890 Gene3D Ribonuclease Inhibitor 149 221 IPR032675 -
Lele50g0607 890 Gene3D Ribonuclease Inhibitor 35 148 IPR032675 -
Lele50g0607 890 ProSiteProfiles Protein kinase domain profile. 602 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0607 890 PANTHER LEUCINE RICH REPEAT KINASE 2 145 885 - -
Lele50g0607 890 FunFam Putative LRR receptor-like serine/threonine-protein kinase 579 678 - -
Lele50g0607 890 Pfam Protein kinase domain 604 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0607 890 SUPERFAMILY L domain-like 80 167 - -
Lele50g0607 890 Gene3D Ribonuclease Inhibitor 242 513 IPR032675 -
Lele50g0607 890 Gene3D Transferase(Phosphotransferase) domain 1 680 889 - -
Lele50g0607 890 Pfam Leucine rich repeat 394 450 IPR001611 GO:0005515
Lele50g0607 890 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g12460 172 510 - -
Lele50g0607 890 CDD STKc_IRAK 608 883 - -
Lele50g0607 890 SUPERFAMILY Protein kinase-like (PK-like) 603 881 IPR011009 -
Lele50g0607 890 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g12460 33 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0607 Lele-ChrLele50 3706365 3709120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0607 34 889 Receptor kinase-like Gene Family AT1G62950 65.052 0.0 1102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Lele50g0607 Pkinase 1.9e-36 CL0016