Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0602 ATGGCAGGGCATGGGCACTCTCTTCCTCCGCCATTCCATATGCATCAGCAAACCCAGCATGAGCATCAATTTCAGTCTCTGCACCAAAACGCAGAAGAAGAACAAAGCGGAAGTAGCAGTGGCCTGAACCTCGCCCACAAGAGAGAACGGGAAGAAACCAGCCACAACAACAATACCGATCAAGGCAATATGAATGGGGAAGGGGGAGAAATCTCGAGAAGGCCCCGAGGAAGACCCGCCGGATCCAAGAACAAACCCAAACCACCCATCATCATAACCCGAGACAGTGCCAATGCCCTTAGAACCCACGTCATGGAGGTAGTCGACGGTTCTGACATCGTCGACAGCGTCTCCAGCTTCACCAGGCGACGCCAGAGTGGGGTTTGTATTATGAGCGGCACCGGCACCGTCACCAATGTCACTTTGAGGCAACCCGCTTCTTCCGGTGCTGTCGTCACTCTTCACGGAAGGTTCGAGATCTTGTCGCTCGCTGGCTCCTTCTTGCCGCCACCGGCTCCACCGGCAGCATCCGGTTTGACCATATATTTGGCTGGCGGACAAGGTCAGGTGGTCGGGGGAACCGTGGTGGGCACGCTCATGGCTGCGGGACCAGTGGTGATCATGGCAGCGTCGTTTAGCAACGCTGCGTACGAGAGGCTTCCTTTAGAGGAAGAAGACCCATCGGAGGCGATTCAAGGGACCGGAATTGGGTCACCGGGAGCAGTTGGTCAGCAACAGCAACAGTTATTAGGGGACGCATCAGGTCCACTCATGCATGCTTTGCCTCCTGATCTTCTGAATTCTATGCAGATGGCGTCTGATCAACCTTTCTGGGCTAATGCTCGTCCTCCCTTCGGATGA 861 0.554 MAGHGHSLPPPFHMHQQTQHEHQFQSLHQNAEEEQSGSSSGLNLAHKREREETSHNNNTDQGNMNGEGGEISRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEVVDGSDIVDSVSSFTRRRQSGVCIMSGTGTVTNVTLRQPASSGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGTVVGTLMAAGPVVIMAASFSNAAYERLPLEEEDPSEAIQGTGIGSPGAVGQQQQQLLGDASGPLMHALPPDLLNSMQMASDQPFWANARPPFG 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0602 286 FunFam AT-hook motif nuclear-localized protein 100 227 - -
Lele50g0602 286 MobiDBLite consensus disorder prediction 12 43 - -
Lele50g0602 286 MobiDBLite consensus disorder prediction 225 246 - -
Lele50g0602 286 ProSiteProfiles PPC domain profile profile. 97 234 IPR005175 -
Lele50g0602 286 SUPERFAMILY AF0104/ALDC/Ptd012-like 97 227 - -
Lele50g0602 286 MobiDBLite consensus disorder prediction 1 92 - -
Lele50g0602 286 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 32 279 IPR014476 GO:0003680
Lele50g0602 286 CDD DUF296 101 168 IPR005175 -
Lele50g0602 286 Pfam Plants and Prokaryotes Conserved (PCC) domain 101 214 IPR005175 -
Lele50g0602 286 PIRSF ESCAROLA 13 285 IPR014476 GO:0003680
Lele50g0602 286 Gene3D - 100 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0602 Lele-ChrLele50 3686017 3686877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0602 7 285 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 54.717 7.04e-81 245