Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0575 ATGGACTTGAAATCGTCTCATGTGTCTCCTGTTCTGACTGACCCTGTTCCTGTTAACAAGTCGAGACTAGGAATCCATGCTAGCGTATTAAGTTACTCCCAGCAGGATCCTGCTCCTACAGCTCCGGGCAAGTATACAAGAACGGGTTCGAGAAAAAGTGCTGGAAATCTTGATGATGTTCGCTCCAATGGATGGCTAGACGCCATGAAGGCTTCATCGCCGCCGAGGAAGAAGCTGGTTAAGGCTTCTAATAACACTCAGGTCACTTATTTTGACTCTGACAATGACGACTATAACTCCTGGAAGCGTGATTATCCATCCGTACTGGACGCTTTTGATAACCTTGTTGAGCGTGCAAAGGATAAGAAGATTGCATTGTTTCTTGATTATGATGGAACTCTTTCACCAATAGTCGACGATCCAGATTCTGCGTTTATGTCCGAAGCTATGCGGGCGACGGTAAGGAGTGTGGCAAAGTGCTTTCCCACGGCAATCGTCAGCGGAAGAAGCCGTGATCAGGTTTTTGATTTAGTAAAATTAACGGAGCTCTACTATGCTGGGAGTCATGGGATGGACATCATTGGCCCTGCCAGTGAAGCTCTGTTCAATAACCATCCAAATTGTGTGAAATCTACTGACCATCAGGGAAGTGAAATAACTCTGTTTCAACCCGCAAAAGAATTCCTGCCTATGATCGACGAGGTTTTTAGAACCCTGGTCGAGATAACTAGAGATATCGAAGGCGCAAAGGTTGAAAATCACCAGTTTTGCGCCTCTGTACATTATCGTAATGTAGATGAGAATAATTGGATAACTGTTGGACAACTTGTCCATGACATTTTAAAAAACTACCCCCGTTTACGTTCAACTCACGGACGCAAGGTTTTAGAGGTGCGTCCGGCGATTGACTGGAACAAAGGAAAGGCAATAGAGTTTTTACTGGAGTCTCTGGGGTTAAGCGACAGGGACGATGTGATCGCCATCTACATTGGGGACGATAAGACGGACGAAGATGCGTTTAAGGTATTGCGGGAGAACAAGAGGGGATATGGCATTGTGGTGTCTTCGGTGAGGAAAGAGAGCAACGCGTTTTACTCGCTGAGGGACACGTCGGAGGTGATGAAGTTTCTGCAGCATCTGGTGAATTGGAAGAGGCAACAAGACGACGACCAGAAGCAATCCCTATCTCTTGGATTCTGGTTTTGA 1206 0.461 MDLKSSHVSPVLTDPVPVNKSRLGIHASVLSYSQQDPAPTAPGKYTRTGSRKSAGNLDDVRSNGWLDAMKASSPPRKKLVKASNNTQVTYFDSDNDDYNSWKRDYPSVLDAFDNLVERAKDKKIALFLDYDGTLSPIVDDPDSAFMSEAMRATVRSVAKCFPTAIVSGRSRDQVFDLVKLTELYYAGSHGMDIIGPASEALFNNHPNCVKSTDHQGSEITLFQPAKEFLPMIDEVFRTLVEITRDIEGAKVENHQFCASVHYRNVDENNWITVGQLVHDILKNYPRLRSTHGRKVLEVRPAIDWNKGKAIEFLLESLGLSDRDDVIAIYIGDDKTDEDAFKVLRENKRGYGIVVSSVRKESNAFYSLRDTSEVMKFLQHLVNWKRQQDDDQKQSLSLGFWF 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0575 401 MobiDBLite consensus disorder prediction 33 61 - -
Lele50g0575 401 TIGRFAM T6PP: trehalose-phosphatase 122 381 IPR003337 GO:0003824|GO:0005992
Lele50g0575 401 CDD HAD_TPP 125 375 - -
Lele50g0575 401 FunFam Trehalose 6-phosphate phosphatase 231 390 - -
Lele50g0575 401 FunFam Trehalose 6-phosphate phosphatase 225 301 - -
Lele50g0575 401 SUPERFAMILY HAD-like 125 385 IPR036412 -
Lele50g0575 401 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 126 344 IPR006379 -
Lele50g0575 401 FunFam - 124 176 - -
Lele50g0575 401 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 44 391 IPR044651 GO:0004805|GO:0005992
Lele50g0575 401 Pfam Trehalose-phosphatase 127 371 IPR003337 GO:0003824|GO:0005992
Lele50g0575 401 MobiDBLite consensus disorder prediction 33 57 - -
Lele50g0575 401 Gene3D - 124 212 IPR023214 -
Lele50g0575 401 Gene3D - 224 396 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0575 Lele-ChrLele50 3492916 3494884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0575 120 380 Trehalose Biosynthesis Gene Families AT1G70290 26.812 1.28e-11 64.7