Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0558 ATGCAAAGAAGCGCTAGGAAGGCGACGACCAGGAATTCAGGCTCAAACTTTCTGAAACCATTTTTAATGATAACTATAGCTAAATTTATATGTCAGACGCCAAAATCACAACAACAAACGAAAGATCATTCACTTTTCCTGACTTTTGACTCAATCGAGGTTGAGGAAACGCTCGGTTTGTTGAGAGCTGGTTTTATTATTGGCTATCGTCAGAGTCAAGTGCTAGGAGTCCGCCACCCCCAACCTCAATTGGGAGCTAAAAAAAGCTTCGAAATGACATTCAATTATGAAATCTTTACGCCTGATTCTACCATCGTTTCCGAGTTTAAGATGGGGTGTGATTTTTCCAAGTTCTCAGCGTGCTGCTCGGGTACAGGGCAAAATGGTCCAGTTCCTGAAGCAAACATTGATGAAAATGAAGAGAATCATGAGGCCACTGATGTGCCACCATTTCAAGAATATACAATTGATCAGCTTAGGAAGGCTACTTCTGGATTTGCCGTCGAGAATATAGTTTCTGAGCATGGAGAAAAGGCTCCAAATGTGGTTTATAAAGGGAAACTAGAAAATCAAACTCGAATTGCTGTCAAACGGTTCAATAGATCAGCCTGGCCTGATGCTCGACAATTTTCAGAAGAAGCCAGGGCTGTTGGACATCTAAGGAACGAAAGATTGGCAAATCTACTTGGATGTTGCAGTGATGGTGATGAGAGGTTACTTGTTGCAGAATATATGCCTAATGATACTTTGGCTAAGCACTTGTTCCACTGGGAAACTCAGCCCATGAAATGGGCAATGAGACTAAGGGTTGCTTTATACCTTGCCCAAGCGCTAGAATATTGTACTAGCAAAGGACGTGCACTATATCATGATCTAAATGCTTATAGAGTACTTTTTGATGATGAAGGAAATCCTAGGCTCTCATGCTTTGGTTTGATGAAAAACAGTCGGGATGGTAAAAGTTATAGTACAAACCTGGCCTTTACCCCGCCTGAGTATTTAAGGACAGGTAGAGTTACTCCTGAAAGTGTAACATATAGTTTTGGAACCCTTTTGCTCGACCTTCTAAGTGGAAAACATATTCCTCCAAGCCATGCACTTGACCTGATTCGTGACAGAAACCTTCAAATGCTGACAGATTCTTGTTTAGAAGGACAATTTTCAAATGATGAGGGGACTGAATTAGTGCGCTTAGCCTCACGATGTTTACAATCAGAACCACGGGAGCGTCCTTATCCAAAGTCATTGGTTTCTGCTTTAATACCTCTACAAAAGGATTCTGAGGTTCCTTCTCATGTTTTGATGGATATACCACATGGCACAAATGCTTTACCCCTTTCACCATTTGGTGAGGCATGTCTAAGAATGGATTTGACTGCCATCCATGAGGTCCTTGAAAAACTTGGGTACAAAGATGATGAGGGTGCTGCTACTGAGCTTTCATTCCAAATGTGGACCAACCAGATGCAGGAAACATTGAATTCAAAGAAAAAGGGTGATTCTGCTTTTCGTCATAAAGACTTCAAAGCTGCAATTGACAGCTATACTCAGTTCATTGATGTTGGAACTATGGTTTCGCCAACTGTTCATGCACGCCGCAGTCTGTCTTATCTCATGAACAACATGCCAGAAGAAGCACTGAAGGATGCAATGCAAGCACAAATAGTTTCTCCTGTTTGGTATATAGCTTCCTACTTGCAAGCTGTGTCACTTCTTGCATCAGGCAGGGAAAATGAGGCCCAGGCGGCACTTAGAGAGGCTTCTTCACTTGAAAGTAAAAAGAACACAAATTAA 1794 0.4186 MQRSARKATTRNSGSNFLKPFLMITIAKFICQTPKSQQQTKDHSLFLTFDSIEVEETLGLLRAGFIIGYRQSQVLGVRHPQPQLGAKKSFEMTFNYEIFTPDSTIVSEFKMGCDFSKFSACCSGTGQNGPVPEANIDENEENHEATDVPPFQEYTIDQLRKATSGFAVENIVSEHGEKAPNVVYKGKLENQTRIAVKRFNRSAWPDARQFSEEARAVGHLRNERLANLLGCCSDGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTSKGRALYHDLNAYRVLFDDEGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSNDEGTELVRLASRCLQSEPRERPYPKSLVSALIPLQKDSEVPSHVLMDIPHGTNALPLSPFGEACLRMDLTAIHEVLEKLGYKDDEGAATELSFQMWTNQMQETLNSKKKGDSAFRHKDFKAAIDSYTQFIDVGTMVSPTVHARRSLSYLMNNMPEEALKDAMQAQIVSPVWYIASYLQAVSLLASGRENEAQAALREASSLESKKNTN 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0558 597 SUPERFAMILY Protein kinase-like (PK-like) 142 430 IPR011009 -
Lele50g0558 597 Gene3D Phosphorylase Kinase; domain 1 139 244 - -
Lele50g0558 597 Gene3D Transferase(Phosphotransferase) domain 1 246 437 - -
Lele50g0558 597 Pfam Protein tyrosine and serine/threonine kinase 182 419 IPR001245 GO:0004672|GO:0006468
Lele50g0558 597 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 134 595 IPR045845 GO:0004672|GO:0009742
Lele50g0558 597 FunFam probable serine/threonine-protein kinase At5g41260 246 437 - -
Lele50g0558 597 FunFam probable serine/threonine-protein kinase At4g35230 141 244 - -
Lele50g0558 597 Gene3D Tetratricopeptide repeat domain 486 597 IPR011990 GO:0005515
Lele50g0558 597 SUPERFAMILY TPR-like 496 592 IPR011990 GO:0005515
Lele50g0558 597 ProSiteProfiles Protein kinase domain profile. 169 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0558 597 FunFam probable serine/threonine-protein kinase At4g35230 490 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0558 Lele-ChrLele50 3363924 3370911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0558 139 420 Glycoside Hydrolase AT3G07070 34.516 1.81e-42 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lele50g0558 PK_Tyr_Ser-Thr 6.3e-26 CL0016