Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele50g0546 | ATGGAGAGGCACAAATGCAAGCTTTGCTCTCGAACGTTCGCCAATGGCAGAGCATTAGGTGGTCACATGAAAGCTCACTTGGCCTCTCTTCCTCTTCCTCCCAAGCCCCAATCTCTGATCACTCCTTCAGCACCTTCCTTCTCTTATTCCTCTTCCGACGACGACGAAGAAAAAGTTGAAGTAGCTCCTGCTTACAACAGAGAATCCGACGACAAGGCTTTGAGTTATGGTTTGAGAGAGAATCCAAGGAAAAATTTAAGGTTCGCAGATCCTGAGTTCTCTTTTACGGTTGATGCTGGCTCCGTCGTCCAAGATAGAGAAAGCGAGACGGAGTCAAAGAATCCGACTCGCCGGCGATCCAAGCGAGCCAGAAAATCCAGCGTCGGAGCTAGTCAGAAATTTGAAGTGAACAAGGTCAAGTCAAATTTGACGGAGTCACCGACGGAGCCAGAACCGGTGAGCTCGGTTTCAGATACTTCACCGGATGAACATGTTGCTCTGTGCCTCATGATGCTTTCGAGAGACAAATGGATGAGAAACGTCGTGGAACAAGATCAAGTGGTGGAGAGATTGAAGGGAACAGAAGAGATCAAGTTGAAGAGGAAGCATCGATCTGATAACGCTAAGAAAACTTCTCGACCTTCTCGAGCACTGAAAACTCATCACAATAGCACCTTCTTCCCTGAAGAAGCAGAGACCAAAATTGCAGGTAACAATAAAATTTTCCAATGCCCATTTTGTTACAAAGTCTTCGGGACGGGGCAAGCACTCGGTGGCCACAAGAGATCCCACCTCCTACCATCTTCGTCGTCAACCGCTATCCACTCTGCTAAATGTTCCATAGATCTCAACCTGCCAGCTCCGGCGGAAGAAGATGAACTAAGCGTGGTTTCTGATGCGTAA | 903 | 0.4784 | MERHKCKLCSRTFANGRALGGHMKAHLASLPLPPKPQSLITPSAPSFSYSSSDDDEEKVEVAPAYNRESDDKALSYGLRENPRKNLRFADPEFSFTVDAGSVVQDRESETESKNPTRRRSKRARKSSVGASQKFEVNKVKSNLTESPTEPEPVSSVSDTSPDEHVALCLMMLSRDKWMRNVVEQDQVVERLKGTEEIKLKRKHRSDNAKKTSRPSRALKTHHNSTFFPEEAETKIAGNNKIFQCPFCYKVFGTGQALGGHKRSHLLPSSSSTAIHSAKCSIDLNLPAPAEEDELSVVSDA | 300 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele50g0546 | 300 | MobiDBLite | consensus disorder prediction | 200 | 223 | - | - | |
Lele50g0546 | 300 | MobiDBLite | consensus disorder prediction | 33 | 77 | - | - | |
Lele50g0546 | 300 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 242 | 264 | IPR013087 | - | |
Lele50g0546 | 300 | PANTHER | ZINC FINGER PROTEIN ZAT1-RELATED | 1 | 300 | IPR044303 | GO:0006355 | |
Lele50g0546 | 300 | Pfam | C2H2-type zinc finger | 242 | 264 | - | - | |
Lele50g0546 | 300 | Pfam | C2H2-type zinc finger | 3 | 28 | - | - | |
Lele50g0546 | 300 | SMART | c2h2final6 | 4 | 26 | IPR013087 | - | |
Lele50g0546 | 300 | SMART | c2h2final6 | 242 | 264 | IPR013087 | - | |
Lele50g0546 | 300 | MobiDBLite | consensus disorder prediction | 130 | 160 | - | - | |
Lele50g0546 | 300 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 4 | 31 | IPR013087 | - | |
Lele50g0546 | 300 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 244 | 264 | IPR013087 | - | |
Lele50g0546 | 300 | SUPERFAMILY | beta-beta-alpha zinc fingers | 3 | 264 | IPR036236 | - | |
Lele50g0546 | 300 | MobiDBLite | consensus disorder prediction | 203 | 217 | - | - | |
Lele50g0546 | 300 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 6 | 26 | IPR013087 | - | |
Lele50g0546 | 300 | MobiDBLite | consensus disorder prediction | 51 | 77 | - | - | |
Lele50g0546 | 300 | MobiDBLite | consensus disorder prediction | 99 | 160 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele50g0546 | Lele-ChrLele50 | 3288733 | 3289635 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele50g0546 | 2 | 295 | C2H2 Transcription Factor Family | AT1G02030 | 36.760 | 6.00e-39 | 136 |