Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0539 ATGGGTGAACTTAGGGCGGATGCAGTGTTGGATGCACCGGGACTGGTGGCGGTGGCGCATGCGTTTGCCTTGTTTGTAGGGGTGGCGGTGGCAGCCAACATCTCAGGTGGCCATTTGAACCCGGCAGTTACTTTTGGATTGATAATTGGAGGCAACATCCCCATCTTAACTGCCATTTTGTACTGGATTTTCCAATTGCTTGGCTCCATCGTCGAATAAGGGTTCTCTTGGGACTATTGCGCCCATTGCAATTGGGTTCATTGTGGGCGCCACATCTTGGCTGCCGGTCCATTTAGGGGCGGTTCAATGAACCCGGCTCGTTGTTTGGCCCAGCCGTGGTCAGAGGCAACTTCGCTGATAACTAACTGGATTTACTGGTTTGGCCCATTGGTCGGTGGCGGCGCCGGATTGGTCTATGGGGATATCTTAATTGGTTCTTACGCTCCAGTTCCTGCGGATCTGGAGAAGCCGAAGCTTGTAAAACCGATGAAGAGTGCCAAGAACAATGCGATGCGGGAGGCTGCAAAAAGAAGTGCCTTGGATTGCCTAGTTTTTGCTTCAAAGGCTTGTGTGCCTGCCCTTTTGGCACGGGACATACTTCCACCAGACCTATCCCAAATTCCACTTGTTCTGTCGATCAAGATTGCTCTAACCTCTGTCCTTCCGTCTGTAACGTTATGGCTTGTGTTGAGGCCAAGTGTCATTGCGGGTGTTCAGGATGAGGAAGCAAGCATAATCATCTTCTTATTTCATGCATCCGTCGTCTTATAA 771 0.5071 MGELRADAVLDAPGLVAVAHAFALFVGVAVAANISGGHLNPAVTFGLIIGGNIPILTAILYWIFQLLGSIVEXGFSWDYCAHCNWVHCGRHILAAGPFRGGSMNPARCLAQPWSEATSLITNWIYWFGPLVGGGAGLVYGDILIGSYAPVPADLEKPKLVKPMKSAKNNAMREAAKRSALDCLVFASKACVPALLARDILPPDLSQIPLVLSIKIALTSVLPSVTLWLVLRPSVIAGVQDEEASIIIFLFHASVVL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0539 256 Pfam Major intrinsic protein 92 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele50g0539 256 Pfam Major intrinsic protein 16 72 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele50g0539 256 SUPERFAMILY Aquaporin-like 15 150 IPR023271 -
Lele50g0539 256 ProSitePatterns MIP family signature. 38 46 IPR022357 -
Lele50g0539 256 PRINTS Major intrinsic protein family signature 20 44 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele50g0539 256 PRINTS Major intrinsic protein family signature 57 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele50g0539 256 PANTHER AQUAPORIN-8 15 71 IPR034294 -
Lele50g0539 256 Gene3D Glycerol uptake facilitator protein. 3 81 IPR023271 -
Lele50g0539 256 Gene3D Glycerol uptake facilitator protein. 89 149 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0539 Lele-ChrLele50 3234488 3238277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0539 3 151 Major Intrinsic Protein MIP AT3G16240 39.234 4.02e-33 119