Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0532 ATGGAGCCAATTCACAAAGCTAATGGCATTGTGAAAACGAAATTTCGACTTGTGAGTTTACTAGAAGGAGAAGAAGAGCTTTGTGAACAAAACGACCAAATCATTTGCCTACGTACTCTGTTTGGTCTGATTTTAGCTGAATCAGAAGCCGTCGATATGACTCGGCGATGTTCTCATTGCAGCCACAATGGCCATAACTCAAGGACTTGCCCGAATCGCGGGGTTAAGCTCTTTGGAGTTCGATTGACCGATGGCTCGATCCGGAAGAGTGCTAGTATGAGTAGTCTCAGCCACTATGCTGGCTCTAGCTCCGGAGCTCATCACGCTGGTTCCGTCAATCCGGGTTCGCCCGGTGACACGCCTGATCATGGTGCTGCAGCCGACGGTTACGCCTCCGAGGATTTTTTTCCTGGTTCATCGTCAGTTCCCCGGGAGAGGAAGAAGGGTGTTCCGTGGACTGAGGAGGAGCATAGATTGTTCTTACTTGGACTGCAGAAGCTTGGCAAAGGAGATTGGCGTGGAATTGCACAGAATTATGTCTTATCAAGGACACCTACTCAAGTAGCAAGCCATGCTCAGAAATATTTCATCAGGCAAAGCAACGTGTCTAGGAGGAAAAGACGTTCAAGCTTGTTTGACATTGTTGCTGATGAAAATGCTGATACACCAATGACAGAACAAGACTTCTTGCCAGCTAGTCAGCCAGAGGCTGAAACAGGAGGCAATGACCCCTTGCCAGCTCCCTCAGCCATCGACAAAGAGTGTGAATCCATGGATTCTGCTTATTTGAACGATGGAGACTCTGCCTCTTTAAAGCCAGATAGTTCAGAGTCACACTCACAGTTCCCAGTGCTATATCCTGCTTACTTTTCTCCTTTTGTCCCATTTCCTCTGCCGTACTGGTCTGGATACAGTCCAGAGCCCACCAAGAAGGAGACAGAACATGAAGTGCTGAAGCCTACTGCAGTACATTCTAAAAGCCCCATCAATGTTGATGAATTAGTTGGCATGTCAAAACTCAGTTTAGGGGACTCTATTGGTGATTCTGGCCCTTCCTCTCTTTCACTAAAACTCCTCGAGGGACCCTCTCGGCAGTCAGCTTTTCATGCAACTCCCTCATATGGTAATTCAGGCATGAATGGCAATGCAATCCCTGCAGTTTAA 1164 0.4759 MEPIHKANGIVKTKFRLVSLLEGEEELCEQNDQIICLRTLFGLILAESEAVDMTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMSSLSHYAGSSSGAHHAGSVNPGSPGDTPDHGAAADGYASEDFFPGSSSVPRERKKGVPWTEEEHRLFLLGLQKLGKGDWRGIAQNYVLSRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADENADTPMTEQDFLPASQPEAETGGNDPLPAPSAIDKECESMDSAYLNDGDSASLKPDSSESHSQFPVLYPAYFSPFVPFPLPYWSGYSPEPTKKETEHEVLKPTAVHSKSPINVDELVGMSKLSLGDSIGDSGPSSLSLKLLEGPSRQSAFHATPSYGNSGMNGNAIPAV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0532 387 SUPERFAMILY Homeodomain-like 146 201 IPR009057 -
Lele50g0532 387 SMART sant 148 198 IPR001005 -
Lele50g0532 387 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 147 199 IPR006447 GO:0003677
Lele50g0532 387 ProSiteProfiles Myb-like domain profile. 144 196 IPR001005 -
Lele50g0532 387 ProSiteProfiles SANT domain profile. 152 200 IPR017884 -
Lele50g0532 387 PANTHER TRANSCRIPTION FACTOR KUA1 55 326 - -
Lele50g0532 387 MobiDBLite consensus disorder prediction 232 251 - -
Lele50g0532 387 MobiDBLite consensus disorder prediction 368 387 - -
Lele50g0532 387 Gene3D - 150 202 - -
Lele50g0532 387 CDD SANT 151 196 IPR001005 -
Lele50g0532 387 Pfam Myb-like DNA-binding domain 151 196 IPR001005 -
Lele50g0532 387 FunFam transcription factor MYB1R1 150 201 - -
Lele50g0532 387 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 144 200 IPR017930 -
Lele50g0532 387 MobiDBLite consensus disorder prediction 98 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0532 Lele-ChrLele50 3196447 3199210 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele50g0532 Myb_DNA-binding 2.4e-11 CL0123