LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele50g0528	ATGCATCTAGAGGAATTGAAGGGAGAAGAGGTGGGAGATAGAGAGGAAGGGAAAGTATATCTCGGAAATGGTGTTATTGGCGGGGCAAGTTTTGTCATGTCAGATGCGAAAAGGGCTCTGGTTGGAGCGGGGGCCCGTGCTCTCTTCTATCCCACTCTGCTTTATAATGTCGTCAGGAATAAGGTGCAGTCCGAGTTTCGGTGGTGGGATAAGGTTGATGAGTTCATATTATTGGGTGCTGTTCCCTTCCCTATTGATGTTCCCCGCTTAAAGGAGCTGGATGTTCGAGGAGTCATCACATTGAATGAGTCATATGAGACTTTGGTGCCAACCTCACTTTATCACGCTCATGGAATTGACCATCTTGTGATTCCTACTAGAGATTACTGTTTCGCACCTTCATTACATGACATATGCTCCGCTGTAGACTTCATTCATGAAAATGCGTTGTCTGGACGAGTTACATATGTCCATTGCAAAGCTGGGCGTGGTCGCAGCACAACTGTTGTGATCTGTTACCTGGTGCATCACAAGCTTATGACACCCAGTGCTGCATATGATTATGTAAAGTCAATTCGACCAAGGGTTCTTCTGGCTTCCTCTCAGTGGCAAGCTGTTCAGGAATACTTCCACCTTAGGGTTAGGAAAGCCATAGCGTATGCTCCCTCAGCAACGCTAGTAATTAAGGCACCATCAGCAGCAGCGTCACTAGAGCTTGTAACATTTGATGAGGGCTCAGTAGTTGTGGTAAAGGAATCAGATCTGGAAGGTTACGACCCCAGTTTGGGAAGGGAGATATGGGCAAATGTGAGCTTGGTTTACCGTGTGCGTGTTGTGGGGCAGGCAGCACTGGCAAGAATATCTTGCCTTTGGCTCAGATATGGTCAGCATCAGCAGGTTTCCTCAGGCATTAGTGTTGATATCCATGTCTACTGA	936	0.4712	MHLEELKGEEVGDREEGKVYLGNGVIGGASFVMSDAKRALVGAGARALFYPTLLYNVVRNKVQSEFRWWDKVDEFILLGAVPFPIDVPRLKELDVRGVITLNESYETLVPTSLYHAHGIDHLVIPTRDYCFAPSLHDICSAVDFIHENALSGRVTYVHCKAGRGRSTTVVICYLVHHKLMTPSAAYDYVKSIRPRVLLASSQWQAVQEYFHLRVRKAIAYAPSATLVIKAPSAAASLELVTFDEGSVVVVKESDLEGYDPSLGREIWANVSLVYRVRVVGQAALARISCLWLRYGQHQQVSSGISVDIHVY	311

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele50g0528	311	ProSiteProfiles	Tyrosine specific protein phosphatases domain profile.	136	204	IPR000387	GO:0016311\|GO:0016791
	Lele50g0528	311	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	61	212	IPR029021	-
	Lele50g0528	311	CDD	PTPMT1	68	210	IPR044596	GO:0004721
	Lele50g0528	311	SMART	dsp_5	71	212	IPR020422	GO:0006470\|GO:0008138
	Lele50g0528	311	FunFam	Dual specificity phosphatase domain protein	68	215	-	-
	Lele50g0528	311	Gene3D	Protein tyrosine phosphatase superfamily	68	215	IPR029021	-
	Lele50g0528	311	Pfam	Dual specificity phosphatase, catalytic domain	90	209	IPR000340	GO:0008138\|GO:0016311
	Lele50g0528	311	ProSitePatterns	Tyrosine specific protein phosphatases active site.	157	167	IPR016130	GO:0016311\|GO:0016791
	Lele50g0528	311	PANTHER	PHOSPHATIDYLINOSITOL PHOSPHATASE	18	296	-	-
	Lele50g0528	311	ProSiteProfiles	Dual specificity protein phosphatase domain profile.	68	215	IPR020422	GO:0006470\|GO:0008138

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele50g0528	Lele-ChrLele50	3148738	3151442	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele50g0528	1	311	Protein tyrosine phosphatase (PTP) family	AT2G35680	58.457	2.51e-131	375

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