Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0528 ATGCATCTAGAGGAATTGAAGGGAGAAGAGGTGGGAGATAGAGAGGAAGGGAAAGTATATCTCGGAAATGGTGTTATTGGCGGGGCAAGTTTTGTCATGTCAGATGCGAAAAGGGCTCTGGTTGGAGCGGGGGCCCGTGCTCTCTTCTATCCCACTCTGCTTTATAATGTCGTCAGGAATAAGGTGCAGTCCGAGTTTCGGTGGTGGGATAAGGTTGATGAGTTCATATTATTGGGTGCTGTTCCCTTCCCTATTGATGTTCCCCGCTTAAAGGAGCTGGATGTTCGAGGAGTCATCACATTGAATGAGTCATATGAGACTTTGGTGCCAACCTCACTTTATCACGCTCATGGAATTGACCATCTTGTGATTCCTACTAGAGATTACTGTTTCGCACCTTCATTACATGACATATGCTCCGCTGTAGACTTCATTCATGAAAATGCGTTGTCTGGACGAGTTACATATGTCCATTGCAAAGCTGGGCGTGGTCGCAGCACAACTGTTGTGATCTGTTACCTGGTGCATCACAAGCTTATGACACCCAGTGCTGCATATGATTATGTAAAGTCAATTCGACCAAGGGTTCTTCTGGCTTCCTCTCAGTGGCAAGCTGTTCAGGAATACTTCCACCTTAGGGTTAGGAAAGCCATAGCGTATGCTCCCTCAGCAACGCTAGTAATTAAGGCACCATCAGCAGCAGCGTCACTAGAGCTTGTAACATTTGATGAGGGCTCAGTAGTTGTGGTAAAGGAATCAGATCTGGAAGGTTACGACCCCAGTTTGGGAAGGGAGATATGGGCAAATGTGAGCTTGGTTTACCGTGTGCGTGTTGTGGGGCAGGCAGCACTGGCAAGAATATCTTGCCTTTGGCTCAGATATGGTCAGCATCAGCAGGTTTCCTCAGGCATTAGTGTTGATATCCATGTCTACTGA 936 0.4712 MHLEELKGEEVGDREEGKVYLGNGVIGGASFVMSDAKRALVGAGARALFYPTLLYNVVRNKVQSEFRWWDKVDEFILLGAVPFPIDVPRLKELDVRGVITLNESYETLVPTSLYHAHGIDHLVIPTRDYCFAPSLHDICSAVDFIHENALSGRVTYVHCKAGRGRSTTVVICYLVHHKLMTPSAAYDYVKSIRPRVLLASSQWQAVQEYFHLRVRKAIAYAPSATLVIKAPSAAASLELVTFDEGSVVVVKESDLEGYDPSLGREIWANVSLVYRVRVVGQAALARISCLWLRYGQHQQVSSGISVDIHVY 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0528 311 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 136 204 IPR000387 GO:0016311|GO:0016791
Lele50g0528 311 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 61 212 IPR029021 -
Lele50g0528 311 CDD PTPMT1 68 210 IPR044596 GO:0004721
Lele50g0528 311 SMART dsp_5 71 212 IPR020422 GO:0006470|GO:0008138
Lele50g0528 311 FunFam Dual specificity phosphatase domain protein 68 215 - -
Lele50g0528 311 Gene3D Protein tyrosine phosphatase superfamily 68 215 IPR029021 -
Lele50g0528 311 Pfam Dual specificity phosphatase, catalytic domain 90 209 IPR000340 GO:0008138|GO:0016311
Lele50g0528 311 ProSitePatterns Tyrosine specific protein phosphatases active site. 157 167 IPR016130 GO:0016311|GO:0016791
Lele50g0528 311 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 18 296 - -
Lele50g0528 311 ProSiteProfiles Dual specificity protein phosphatase domain profile. 68 215 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0528 Lele-ChrLele50 3148738 3151442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0528 1 311 Protein tyrosine phosphatase (PTP) family AT2G35680 58.457 2.51e-131 375