Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0523 ATGATGGCCAATCAAGTTGAGTTTTCCGCCCTCGAACGCATCAAATTACATCTTCTAGGTGAACCCTCTCCGGTGGCAAGTTCTCAATTTTGGTTTGAGGAAGCTAAGTCTTCTATTTCAAGTTCTCAGTCTCTCTGTTCCCAGTCTTCCATTTCTGATGGTAATTCCATCATGTCCGATTACTTTCCTGATGTCCTCGACTTCCCCACCAATCCCGCACCTTCATCACTAGATCAAACGAATCCGTTTGAATTCGAGTCCAAACCCCAAATAATTGACCTCGCCACGCCAAATTCCCAAATCCAAGCTTCGCGGTTCGAAACAAGGGTTCCCAAACTCGAATCGAACACGCAGGGAAGCTCGACTTCAAACAGGTGCGTGTTGGATTTCGACTCGAGACCTCATGAATCGCAGAAGAAATCTCCTTCGAGTAGGAAACCGTCGTTGCAAATCTCGCTTCCGAAGAAGACCGAGTGGATCCAGTTTGGGAATCCGGAGCAGCAAGAGGAGGCAGCTGGGGGTTTGGAGCATAAAAGCCCAGAGGAAGTCGAGAAAAAGCACTACAGGGGTGTCCGACGGAGGCCGTGGGGCAAGTATGCGGCGGAGATACGAGACCCAAACAAGCGGGGATGCAGGGTGTGGTTGGGAACATTCGACACAGCTATCGAAGCCGCCAAAGCCTACGACCGAGCTGCATTCAAGCTTCGCGGCTCCAAAGCCATCCTAAACTTCCCTCTAGAAATAGAAACATCGAGCTCGGTGATTAGCTCCGGCGAGGGAAAACGCCGCCGTCTGGACGAAGAGGAAGCGGCCGAGGTGGAGGTAAAGGCGGTGGTGAAGAAGGCTAAAACGACGACGGAATCGGAGTCTCAGGAGAAGTATAGAAAGGACGCTCCGTTAACACCGTCGAATTGGAAGGGGTTCTGGGACAAGGATTTAAACGGGATTTTCAGTGTGCCGCCGTTATCGCCGTTATCCCCTCTCCCTCCATTGGGCTGTCCACAGCTTATGGTTGTATGA 1020 0.5137 MMANQVEFSALERIKLHLLGEPSPVASSQFWFEEAKSSISSSQSLCSQSSISDGNSIMSDYFPDVLDFPTNPAPSSLDQTNPFEFESKPQIIDLATPNSQIQASRFETRVPKLESNTQGSSTSNRCVLDFDSRPHESQKKSPSSRKPSLQISLPKKTEWIQFGNPEQQEEAAGGLEHKSPEEVEKKHYRGVRRRPWGKYAAEIRDPNKRGCRVWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLEIETSSSVISSGEGKRRRLDEEEAAEVEVKAVVKKAKTTTESESQEKYRKDAPLTPSNWKGFWDKDLNGIFSVPPLSPLSPLPPLGCPQLMVV 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0523 339 MobiDBLite consensus disorder prediction 282 301 - -
Lele50g0523 339 MobiDBLite consensus disorder prediction 282 296 - -
Lele50g0523 339 Gene3D AP2/ERF domain 186 247 IPR036955 GO:0003700|GO:0006355
Lele50g0523 339 SUPERFAMILY DNA-binding domain 187 247 IPR016177 GO:0003677
Lele50g0523 339 Pfam AP2 domain 187 237 IPR001471 GO:0003700|GO:0006355
Lele50g0523 339 PANTHER DNA-BINDING DOMAIN 139 292 IPR044808 GO:0003700|GO:0009873
Lele50g0523 339 MobiDBLite consensus disorder prediction 171 189 - -
Lele50g0523 339 CDD AP2 186 245 IPR001471 GO:0003700|GO:0006355
Lele50g0523 339 PRINTS Ethylene responsive element binding protein signature 188 199 IPR001471 GO:0003700|GO:0006355
Lele50g0523 339 PRINTS Ethylene responsive element binding protein signature 227 247 IPR001471 GO:0003700|GO:0006355
Lele50g0523 339 ProSiteProfiles AP2/ERF domain profile. 187 245 IPR001471 GO:0003700|GO:0006355
Lele50g0523 339 MobiDBLite consensus disorder prediction 167 189 - -
Lele50g0523 339 FunFam Ethylene-responsive transcription factor 2 186 247 - -
Lele50g0523 339 MobiDBLite consensus disorder prediction 108 128 - -
Lele50g0523 339 SMART rav1_2 187 251 IPR001471 GO:0003700|GO:0006355
Lele50g0523 339 MobiDBLite consensus disorder prediction 108 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0523 Lele-ChrLele50 3127089 3128108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0523 2 339 AP2-EREBP Transcription Factor Family AT5G47230 45.507 1.42e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele50g0523 AP2 6.2e-16 CL0081