Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0522 ATGCAAACCCACGACGCCATGCCCCGACCCACAAGCACCGACTCCAACTTAGACTTTTTGGAATCCATTCGTCGTCACTTGCTTGGTGAATCCGAAGCTGCTCCGGCGGCTAAATCCAGTTTCAGCTTACTGGACCCATGCCTGAGTCATCATTGGGGCGAATTGCCTCTCAGACAGGACGACCCCGAAGACACGCTGCTCTTCGGTGTACCCCGGGACGCGCTCCAAGGTGGGCGGGCCCCAACTATGAACGTCAGCTTACCGGAAAGCGTCGGCTCGGCTTTGCCATCCACCATTACGGTGAAACAGGAGCAAGATGTAGTACACGTGGCGGCGGCGGCCCCGCGAGAGAAGGTGAGGCATTACCGAGGAGTGCGTCAACGGCCTTGGGGGAAGTTCGCGGCAGAGATCCGAGACCCGGCTAAGAATGGAGCTCGGGTATGGCTGGGGACATTTGAGACGGCGGAGGATGCGGCTCTGGCATACGACCGAGCCGCATACAGGATGCGGGGCTCGCGGGCTCTAGTTAATTTTCCGCTTAGGTTGAACTCGGGTGAACCGGAGCCGGTGAGAGTGAGGGCGAAGCGGTCTTCAATGGAGGCAATGTCGTCGGGTTCGGAGAGTGGAAAGCGAAAGGAGAAGGTGGCGAGAGGGGAAGTTGGAGGTGAAGTGGCATCTTGTACAAATGGGCAACACCTATTGAGGTTAAGTCGCCAACGCAACATCTCATACGAAGGCTCACTCGCTTTCATGGCCATTTCCAACATCTTCTTCTTCATCATCTTCCTCGTGGCTCCACTGGATTTGGCTCTCGGAAACGTCACTTTGGGTTCAACACTCTCCACCAATGATCAAACTAATCCTTCATGGCTCTCACCTTCAGGCGAATTCGCTTTCGGATTTCGCCCAATCAACAACACGAATCTCTTTTTGCTTGCCATCTGGTTCAACCAATTACCTGACACAACCATTGTCTGGTATGCAAACATGTCAAATCCAGAAGTACCTTCAGGATCGCGAATTCGTCTCACACTAACAGGTCTCAGTCTCACCAATCCTCAAGGCCAAGCCATATGGACCGCTACATCACAAGAAAATGTGTCCCATGGAGCTTTGCTGGACACTGGAAACTTTGTTCTGGCATCCTCAAATTCTTCCTATTTATGGCAAAGTTTTGACAATCCCACTGATACACTCTTGCCAAACCAAACTCTGAGTCTCAACGGTAAGTTGTCTTCTCGCTTGACACAAACTAACTACACAAAGGGAAGGTTCGAGCTTTATTTCGATAATGATGCCAATCTCTTGTTAAGTCAGATAGGTTGGCCAACAGAATCTCGTTACACTAATTACTTTATTCTCAAAGCGAGTTCAGCAACAACCAATGAAAATGATTCTGCTTTACAACTAGTCTTCGATGCATCAAATGTTTATGTAGAGACAAGAGGTGGAGATAAAAAACACCTTGGATCTGGATGGTCGGATTCAACTCTTGATGTTAACAGATTTTATTACAGGGCCACACTTGATTATTATGGAGTTTTTACGTTGTATTCTTTCCCAAAAGGATCTGATGATAGCGACCATGTTTGGTCAATTATGGAGTATGTTCCAAATAACATTTGCATTAACGTGTTTAGTGATTTGGGGAGTGGTTGTTGTGGGTATAATAGCTATTGTTTAATGGAAAATCAGAGGCCAACCTGCAAATGCCTTGATGGGTACTCTCTAATTGATCCACACAACTTATTTGGAGGATGCGAACCTGAAGTTTCACTTGGTTGTGGGGCTGATGATGCAGAATCAAAAACCAATCCTGAAGAGGTTTATGAGTTTAAGGTTATGCAAAATGTGGATTGGCCCTTAGGAGACTATGAAAGATTGTACAATTATACTCAAGATGAATGCCAAAGATCTTGCTGGTATGATTGTAATTGTGCAGTTGCCATTTTTGACAATCATGGTACTTGTTGGAAGAAAAGATTGCCAATTTCTAATGGAAGAGGAAATGCCGGTAGTGGTCAAACGGCACTTGTCAAAACTAGAATTTTGTCAAGGAGCAATCTTCAGCATGTTGAGAACAAAGAACCGGTTCTTTTAGGTTCGCTTATTGGTTCACTTGTCATTAACACTTTGCTTGTAGCCATTCTAGCTATGAGGATTCTCTTCAGGCCAAAAAAGAAAATAGTCCAAGTTTCAAGTGCTGTTGATATAAATCTGCACTCTTTCTCATATGAAGCATTGAAAGAGGCAACTCTTGGATTCAGTGAAGAGTTAGGAAGGGGTTCGTTTGGCATTGTGTACAAAGGCAACCTTAAATCAGAAACTGATAATAACAATGTTGTTGCGGTGAAGAGGTTGGTTAGATTGGCTCAAGAAGGAGAGAAGGAGTTCAGGACAGAGTTGAGTGCCATTGGGAAAACATGCCACAAAAATTTGGTGAGGTTAATTGGCTTTTGTAATGAGGGCGTTCATAGACTTCTGGTGTATGAGTTCATGAGCAATGGAACTCTTGCGGACATTCTCTTTGGAGAAGTTAAACCCATTTGGAATCTAAGGGTTAACTTTGCTTTAGGAATTGCAAGAGGATTGCTTTACTTGCATGAAGAGTGTGACAATGCCATCATTCACTGTGATATAAAACCTCAGAATATACTGATAGATGAAAATTTCACACCCAAAATCTCAGACTTTGGGTTGGCCAAGTTGTTATATTCGAATCAAAGCCGAACTCTTACAATGATAAGAGGAACAAGAGGATATGTAGCACCAGAATGGTTCAAGAGCGTTCCGGTTACTGCTAAAGTGGATGTTTATAGCTATGGCGTGATGCTGCTAGAGATAATTTGTTGCAGAAGAAATGCGATGATGGATATGGATGAAGAAGAAGAAGAAAAGGCAGTGCTAATAGATTGGGCGTATGATTGCTATGCAGAAGGAAGAATAGATGTTTTGGTAGAGAACGATAAGGAAGGCAGGGCTGATATAGAGAGGTTGAAGAAGATGGTGATGATAGCGATATGGTGTATTCAAGAAAAGCATGAAGCAAGGCCAAGCATGAAGACTGTGATGCAAATGTTGGAAGGTCTTGTTGAAGTGCCAAATCCACCATTGCCTTCTTCCTTCTCCACCTCAACCATGAATTGA 3147 0.4468 MQTHDAMPRPTSTDSNLDFLESIRRHLLGESEAAPAAKSSFSLLDPCLSHHWGELPLRQDDPEDTLLFGVPRDALQGGRAPTMNVSLPESVGSALPSTITVKQEQDVVHVAAAAPREKVRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALVNFPLRLNSGEPEPVRVRAKRSSMEAMSSGSESGKRKEKVARGEVGGEVASCTNGQHLLRLSRQRNISYEGSLAFMAISNIFFFIIFLVAPLDLALGNVTLGSTLSTNDQTNPSWLSPSGEFAFGFRPINNTNLFLLAIWFNQLPDTTIVWYANMSNPEVPSGSRIRLTLTGLSLTNPQGQAIWTATSQENVSHGALLDTGNFVLASSNSSYLWQSFDNPTDTLLPNQTLSLNGKLSSRLTQTNYTKGRFELYFDNDANLLLSQIGWPTESRYTNYFILKASSATTNENDSALQLVFDASNVYVETRGGDKKHLGSGWSDSTLDVNRFYYRATLDYYGVFTLYSFPKGSDDSDHVWSIMEYVPNNICINVFSDLGSGCCGYNSYCLMENQRPTCKCLDGYSLIDPHNLFGGCEPEVSLGCGADDAESKTNPEEVYEFKVMQNVDWPLGDYERLYNYTQDECQRSCWYDCNCAVAIFDNHGTCWKKRLPISNGRGNAGSGQTALVKTRILSRSNLQHVENKEPVLLGSLIGSLVINTLLVAILAMRILFRPKKKIVQVSSAVDINLHSFSYEALKEATLGFSEELGRGSFGIVYKGNLKSETDNNNVVAVKRLVRLAQEGEKEFRTELSAIGKTCHKNLVRLIGFCNEGVHRLLVYEFMSNGTLADILFGEVKPIWNLRVNFALGIARGLLYLHEECDNAIIHCDIKPQNILIDENFTPKISDFGLAKLLYSNQSRTLTMIRGTRGYVAPEWFKSVPVTAKVDVYSYGVMLLEIICCRRNAMMDMDEEEEEKAVLIDWAYDCYAEGRIDVLVENDKEGRADIERLKKMVMIAIWCIQEKHEARPSMKTVMQMLEGLVEVPNPPLPSSFSTSTMN 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0522 1048 SUPERFAMILY alpha-D-mannose-specific plant lectins 310 438 IPR036426 -
Lele50g0522 1048 CDD STKc_IRAK 759 1030 - -
Lele50g0522 1048 Gene3D - 394 524 IPR036426 -
Lele50g0522 1048 Pfam AP2 domain 121 171 IPR001471 GO:0003700|GO:0006355
Lele50g0522 1048 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 280 1039 - -
Lele50g0522 1048 PRINTS Ethylene responsive element binding protein signature 122 133 IPR001471 GO:0003700|GO:0006355
Lele50g0522 1048 PRINTS Ethylene responsive element binding protein signature 145 161 IPR001471 GO:0003700|GO:0006355
Lele50g0522 1048 FunFam Ethylene-responsive transcription factor 2 120 180 - -
Lele50g0522 1048 SMART rav1_2 121 185 IPR001471 GO:0003700|GO:0006355
Lele50g0522 1048 Pfam D-mannose binding lectin 323 410 IPR001480 -
Lele50g0522 1048 CDD B_lectin 291 395 IPR001480 -
Lele50g0522 1048 ProSiteProfiles Protein kinase domain profile. 753 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0522 1048 ProSitePatterns Protein kinases ATP-binding region signature. 759 785 IPR017441 GO:0005524
Lele50g0522 1048 Pfam Protein kinase domain 756 1025 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0522 1048 Gene3D AP2/ERF domain 120 181 IPR036955 GO:0003700|GO:0006355
Lele50g0522 1048 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 833 1035 - -
Lele50g0522 1048 Gene3D Phosphorylase Kinase; domain 1 718 832 - -
Lele50g0522 1048 ProSiteProfiles AP2/ERF domain profile. 121 179 IPR001471 GO:0003700|GO:0006355
Lele50g0522 1048 MobiDBLite consensus disorder prediction 189 217 - -
Lele50g0522 1048 SUPERFAMILY DNA-binding domain 121 181 IPR016177 GO:0003677
Lele50g0522 1048 Gene3D Transferase(Phosphotransferase) domain 1 833 1035 - -
Lele50g0522 1048 Gene3D - 273 393 IPR036426 -
Lele50g0522 1048 FunFam S-receptor-like serine/threonine-protein kinase 724 832 - -
Lele50g0522 1048 SUPERFAMILY Protein kinase-like (PK-like) 738 1040 IPR011009 -
Lele50g0522 1048 SMART blect_4 277 395 IPR001480 -
Lele50g0522 1048 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 269 393 - -
Lele50g0522 1048 CDD AP2 121 179 IPR001471 GO:0003700|GO:0006355
Lele50g0522 1048 CDD PAN_AP_plant 591 681 - -
Lele50g0522 1048 SMART serkin_6 753 1031 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0522 1048 ProSiteProfiles Bulb-type lectin domain profile. 271 393 IPR001480 -
Lele50g0522 1048 ProSitePatterns Serine/Threonine protein kinases active-site signature. 875 887 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0522 Lele-ChrLele50 3113273 3120100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0522 702 1032 Receptor kinase-like Gene Family AT5G45780 40.173 3.59e-69 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele50g0522 Pkinase 2.9e-49 CL0016
TF AP2/ERF-ERF Lele50g0522 Pkinase 2.9e-49 CL0016