Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0507 ATGGGTCAACTAGTAGTTTGGGACAATAAAGATACTCTTGACTCTGATAAAAATATGGAAGAGACAAGTGTTGTCCCAAGATCCCAAGGTTTTGGTGTTTATGTTGCTCCTTTTGGTCATGGAAATCTAACTGGTAATGAAAAAGACTCAAATATCACTCGAAATAAAGTGAGGGAGACATTGCGCCTTTTCCAAGCCGTTACTATAAAGCTATTGCAGGAGGAAGAAGCAAAGCCAAAAGACAAAGGGAACACTAATAGGAGGGGTAGGATTGACACAGTAGCAGCTAAGATCCTCAAGCATAAAGGGAAATACGTTAACACAGGGAAGCCGATCTCGGGACTTATCCCTGGGGTTGAAGTTGGTGATGAATTTCAGTACTGGGTGGAGCTTAATATTATTGGCCTTCATCGCCAATCTCAGGGAGGCATAGATTATGTCATGCATAATGGTAAGACCGTTGCAACTAGTGTGGTTTCATCTAAGGGCTATGATGATAAGTCGGGCAGTTCAGATGTCTTGGCTTATACAGGGCAGGGAGGAAGTATGTTAAAGAATGGTAAAGAACCTGAAGACCAGAAGCTTGAGAGGGGCAATCTTGCTTTGAAGAATAGTGTTACAGAAAAGAATTCTGTCAGGGTAATACGTGGCTGTGAATCAACAGAAGGAAAAAGTAGGAGATATGTTTATGATGGGATATATGAAGTTGAGGCTTATTGGCTGGAAATGGGACCACATGGTAAGTTGAATTTTAGGTTTCGGATGCGGAGAATGACAGGTCAACCAGAACTTGCTTGGAAATAA 804 0.4167 MGQLVVWDNKDTLDSDKNMEETSVVPRSQGFGVYVAPFGHGNLTGNEKDSNITRNKVRETLRLFQAVTIKLLQEEEAKPKDKGNTNRRGRIDTVAAKILKHKGKYVNTGKPISGLIPGVEVGDEFQYWVELNIIGLHRQSQGGIDYVMHNGKTVATSVVSSKGYDDKSGSSDVLAYTGQGGSMLKNGKEPEDQKLERGNLALKNSVTEKNSVRVIRGCESTEGKSRRYVYDGIYEVEAYWLEMGPHGKLNFRFRMRRMTGQPELAWK 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0507 267 ProSiteProfiles YDG domain profile. 114 257 IPR003105 -
Lele50g0507 267 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 38 263 - -
Lele50g0507 267 Gene3D - 95 267 IPR036987 -
Lele50g0507 267 SUPERFAMILY PUA domain-like 96 266 IPR015947 -
Lele50g0507 267 Pfam SAD/SRA domain 114 261 IPR003105 -
Lele50g0507 267 SMART G9a_1 109 261 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0507 Lele-ChrLele50 3016387 3017190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0507 51 262 Su(var)3-9 homologs AT5G04940 41.204 5.37e-43 153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0507 50 3016387 3017190 Lele51g0491 51 2884773 2888432 hybridization
Lele50g0507 50 3016387 3017190 Lele52g0508 52 3087475 3089689 hybridization