Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0485 ATGGTTTGTATTAATATGTTTTATTGGCTCTATATTCTCAGGCTTATAAAAGAGTTTGATGCAGAAGTCAAGGCTCTGGAAGGTAGAAATGATAGGGAAACCAACAAAATGCTGAATGAGAAAAAGCAGTCCATGATCAAAGAGTTAAATTCATATGTTGCTCTTAAAAAGCAATATGCCACAGATATTGAGAATAAGCGAATTCAGCTCTTTGAGGGGCCTAATGAAGGCTATGCTGAAGAAAATGTCCTGCTAGCTTCCTAAACTTCTTTCTTTACAGCAATGACAAATCAACAGCTGATTGATAGGGGGAACCGGATGATGGATGAGACAGATCAAGCCATTGAGAGGGGAAAGAAGGTTGTTGAAGAGACAATAAATGTTGGCGTTGAGACTAATGCAGCTCTTAAGGCTCAGGTTTCTACTGACAAGTGTATTATGGCATTAATGGTTCTTATTGTGATTGGAGTGATAGCTATCATTATTGTAAAGCTCTTGATGACCCTCAATCTGCTTTTACATGACAGAGCTTGCTCAGTTGCTTTTGCATGGAGCTACCGAGTCACAGGAATGGCCAAGCTACCAGTCTACTTTCCGTTCTCATGTTTTGAATTTCGGGAATTCTCAGTTTCTCTTGGTTCGGGTTTTATTCCCACTGAATTTCCATCTTTCATTGCATTATACATATCGAAAATGAAGTGCTTCTTGTTCAAATTTAAAAGAGGATCAAAATCCTCCTCAGAATCGCAGAAACAGAGACAGAAGAAATATCCGGGTTCAAATCACGCCGTGAGTTCACCGAGTTCGCTGCCATCGCCGAGAACCTTAACAGAATTGTACAAAGAGAAAGAGCACAATATGAGAGTTTTCACTTCGCAAGAGCTCAGGGAGGCCACGAATGATTTCAATAGGATGCTGAAGATTGGAGAGGGGGGTTTCGGGAGCGTTTATAAAGGTACAATTGGGCCTCAAGATGGTCGAGGTGATCCTATTGTTGTTGCGATAAAAAGCCTCAACACCCGTGGCTTTCAGGGCCATAAACAATGGCTGGCAGAGGTTCAATTTCTGGGCATTGTTTATCACCCAAATTTGGTAAAACTATTGGGATACTGCTCTGAAGATGGAGAAAGAGGAATTCAACGGTTGTTAGTTTATGAGTTCATGCCCAATAAGAGCCTGGAGGATCATCTTTTCAGACGGGATATTCCCACCTTGCCGTGGAAAACAAGATTGAAGATCATGCTCGGTGCTGCCCAAGGATTACTTTATCTACACGAGGAATTAGAGATTCAGGTAATATACCGAGATTTCAAATCTTCCAATGTTTTATTGGACATGAACTTCCATCCAAAGCTTTCAGATTTTGGACTCGCTAGGGAAGGTCCAATTGGTGATAAGACTCACGTGTCCACTGCGGTGGTCGGGACACATGGATATGCTGCCCCAGAATATATAGAAACAGGCCACCTCAAAGTTCAGAGTGATATATGGAGTTTTGGTGTGGTATTATACGAGATGCTTACAGGGAGGCGATCATTAGATAGAAGACGACCGAAAGAACAGAAGCTTCTAGATTGGGTTAAACAGTATCCTGCTGATAGTAGGAGGTTCAGCATGATAATGGACCCTCGACTCAGAAATGAGTACTCACATGGTGCTGCTCGGAGAGTAGCCAAGTTGGCAGACAGATGCTTAAACAAGAAACCTGAAGAAAGGCCATCCATGAGACAGGTAGTGGAAAACTTGAAGAAAGCATTGCAGTATTCAGAAACTTCAAAAATGGCTCCTGAATCACCTCGACCTAAATTGGTTCCAAAAAGCAAATAG 1827 0.4187 MVCINMFYWLYILRLIKEFDAEVKALEGRNDRETNKMLNEKKQSMIKELNSYVALKKQYATDIENKRIQLFEGPNEGYAEENVLLASXTSFFTAMTNQQLIDRGNRMMDETDQAIERGKKVVEETINVGVETNAALKAQVSTDKCIMALMVLIVIGVIAIIIVKLLMTLNLLLHDRACSVAFAWSYRVTGMAKLPVYFPFSCFEFREFSVSLGSGFIPTEFPSFIALYISKMKCFLFKFKRGSKSSSESQKQRQKKYPGSNHAVSSPSSLPSPRTLTELYKEKEHNMRVFTSQELREATNDFNRMLKIGEGGFGSVYKGTIGPQDGRGDPIVVAIKSLNTRGFQGHKQWLAEVQFLGIVYHPNLVKLLGYCSEDGERGIQRLLVYEFMPNKSLEDHLFRRDIPTLPWKTRLKIMLGAAQGLLYLHEELEIQVIYRDFKSSNVLLDMNFHPKLSDFGLAREGPIGDKTHVSTAVVGTHGYAAPEYIETGHLKVQSDIWSFGVVLYEMLTGRRSLDRRRPKEQKLLDWVKQYPADSRRFSMIMDPRLRNEYSHGAARRVAKLADRCLNKKPEERPSMRQVVENLKKALQYSETSKMAPESPRPKLVPKSK 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0485 608 MobiDBLite consensus disorder prediction 252 275 - -
Lele50g0485 608 Gene3D Transferase(Phosphotransferase) domain 1 388 600 - -
Lele50g0485 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Lele50g0485 608 Pfam Protein kinase domain 304 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0485 608 CDD STKc_IRAK 308 584 - -
Lele50g0485 608 Gene3D Phosphorylase Kinase; domain 1 275 387 - -
Lele50g0485 608 MobiDBLite consensus disorder prediction 248 275 - -
Lele50g0485 608 Coils Coil 16 43 - -
Lele50g0485 608 PANTHER OS01G0588500 PROTEIN-RELATED 254 586 - -
Lele50g0485 608 ProSitePatterns Protein kinases ATP-binding region signature. 308 336 IPR017441 GO:0005524
Lele50g0485 608 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 388 596 - -
Lele50g0485 608 ProSiteProfiles Protein kinase domain profile. 302 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0485 608 SUPERFAMILY SNARE fusion complex 95 139 - -
Lele50g0485 608 SUPERFAMILY Protein kinase-like (PK-like) 284 582 IPR011009 -
Lele50g0485 608 MobiDBLite consensus disorder prediction 566 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0485 Lele-ChrLele50 2860759 2867970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0485 234 582 Glycoside Hydrolase AT3G07070 42.222 1.01e-88 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele50g0485 Pkinase 1.1e-46 CL0016