LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele50g0462	ATGGTTTACCATTTTCTTCATACTGAAGGGGCTGAGAACGATGCCAAACCAGCTATGGTTTGTACTGCCAATGATTTACAAAGCTGGAAAGATTTTCCCAAGGGACTTAGGGTTCTTCTCCTTGATGGGGACACCAATTCTGCTGCCGATTTAAGATCAAAGCTTGAGGCCATGGACTATATTGTTTCTATATTTGGCGATGAGAACGAAGCCTTGTTGGCGATCTCAAGCAAACCTGAAGGCTTCCATGTTGCTATTGTGGAGGTTAGTACAAGCAATGACCAAGGATGTTTCAAATTTCTTGAGAATGCCAAGGACTTGCCAACCATTATGACATCAAACGATCATTGCCTCAGCACCATGATGAAGTGTATAGCACTTGGCGCAGTGGAGTTCCTAAGAAAACCGCTCTCAGAGGAAAAGCTCAAGAATATCTGGCAGCATGTGGTTCACAAGGCATTTAATGGTGGGGCGACCGTCCTTCCTGAATCACTAAAACCTGTCAAAGAATCTGTGGTATCAATATTGCAGCTCCAAACAGACAAGGAACAGCAAAGTAAAATCTCGATAGATATCGAGAAAGTATCGAGGTTTAGAGCAAATGATCATGAGTTGTCATCTGGGAGTGATAATAAATACCCAGCTCCTTCAACTCCACAATTAAAACAGGGGGCAAGATTACTGGATGATGGAGATTGCCATGAACAGACTCATTGCTTGACTGGAAAAGAAAGTGGAGAGCTGGATGGGGAAACTATATCTGTCGAAACTACATGTGGGAATTCCAATTCTGAGGGTGCCATGCCTCAACCAAGTAAGCCTGAAACGACCGAAATCAAGAAGGAAGAGGGTTTTGCCAATGGTTCTAAGAGTGAGAGTGATGCTTCTACACATATTCATGATGGAAATTTTGTCAGAAGCAATGGTGATAGTACTCCATCTCCCAAAAAAGTAGGTGTTTGCAGTGATGCATGCGAGATCACAGCTAATAAAAAGAAATCGAAGAAGATGAAGGTAGACTGGACGCCTGAACTGCACAGCAAATTTATTCAGGCAGTGGAACAACTTGGTATTGATCAAGCCATACCTTCTCGAATACTGGAGATAATGAAAGTGGAGGGCTTGACAAGGCATAATGTGGCCAGCCATCTTCAGAAATATAGAATGCACAAGAGACATATTTTGCCGAAGGAAGAAGATCAAAGGTGGCCAAATCAAAGAGATATGATGCAAAGGAGCTACTATATACCAAGACCAATTATGGCCTATCCTCAGTATCATTCTAATCTCACCATATCTCCACCTCCTATGTATCCTATGTGGGGACAAGCGGGAAGTCAACCAGCCGGCGTACAGTTGTGGGGCCCACCTAGCTATCACGTATGGCAGCCTTTCCCAGGGATGCATGCAGAAGCATGGGGTTGCCCCGTGTTGCCACCTCAAAATCCTTGTTTTTCCCACACTCAACATATGCCTGGATTGCACAGTGCTAATAACGTTGAGTATAACTCTAGCATGCCTCCGAGTTTGTTGGAGCATCACCCGGCAGATGAAGTTGTTGACAAGGTTGTGAAGGAGGCAATAAACAAGCCATGGCTGCCCTTGCCCTTAGGTCTGAAACCTCCTTCCACAGATACTGTATTGGCTGAACTCTGTAGGCAAGGCATATCCACCATCCCTCACGGTTCTAAATCCACATAG	1701	0.4444	MVYHFLHTEGAENDAKPAMVCTANDLQSWKDFPKGLRVLLLDGDTNSAADLRSKLEAMDYIVSIFGDENEALLAISSKPEGFHVAIVEVSTSNDQGCFKFLENAKDLPTIMTSNDHCLSTMMKCIALGAVEFLRKPLSEEKLKNIWQHVVHKAFNGGATVLPESLKPVKESVVSILQLQTDKEQQSKISIDIEKVSRFRANDHELSSGSDNKYPAPSTPQLKQGARLLDDGDCHEQTHCLTGKESGELDGETISVETTCGNSNSEGAMPQPSKPETTEIKKEEGFANGSKSESDASTHIHDGNFVRSNGDSTPSPKKVGVCSDACEITANKKKSKKMKVDWTPELHSKFIQAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKYRMHKRHILPKEEDQRWPNQRDMMQRSYYIPRPIMAYPQYHSNLTISPPPMYPMWGQAGSQPAGVQLWGPPSYHVWQPFPGMHAEAWGCPVLPPQNPCFSHTQHMPGLHSANNVEYNSSMPPSLLEHHPADEVVDKVVKEAINKPWLPLPLGLKPPSTDTVLAELCRQGISTIPHGSKST	566

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lele50g0462	566	Gene3D	-	36	155	-	-
Lele50g0462	566	SUPERFAMILY	Homeodomain-like	335	393	IPR009057	-
Lele50g0462	566	MobiDBLite	consensus disorder prediction	300	315	-	-
Lele50g0462	566	MobiDBLite	consensus disorder prediction	257	271	-	-
Lele50g0462	566	MobiDBLite	consensus disorder prediction	257	318	-	-
Lele50g0462	566	MobiDBLite	consensus disorder prediction	275	299	-	-
Lele50g0462	566	Gene3D	-	332	394	-	-
Lele50g0462	566	PANTHER	TRANSCRIPTION ACTIVATOR GLK1	19	561	IPR044825	GO:0003700\|GO:0045893
Lele50g0462	566	FunFam	Two-component response regulator-like APRR2	35	161	-	-
Lele50g0462	566	FunFam	Two-component response regulator	332	395	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele50g0462	Lele-ChrLele50	2665104	2670780	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele50g0462	19	563	Response Regulator Gene Family	AT4G18020	48.691	3.67e-142	420

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GARP-ARR-B	Lele50g0462		Myb_DNA-binding	1.2e-07	CL0123

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele50g0462	50	2665104	2670780	Lele51g0444	51	2579970	2584987	hybridization
	Lele50g0462	50	2665104	2670780	Lele52g0459	52	2738437	2744131	hybridization

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