Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0454 ATGGGTTGCTTAAACTCTAAAACAGCTTATCTTCACTCCCCTGACGATCCCTTTGCATTCCCTGACGCCAACAAACCTGATCCAGCTAATGAGGATGATGTTGATCAAGAATGTCAAGTCCCAGCATTCGAAGAGTTCGGTCTCAATGAACTCCGAAGGGCTACGAACGAGTTCAGCACAAATTACATAGTGTCGGAAAGTGGCGAGAAAGCTCCCAATGTGGTTTACAAAGGGAAGCTCGAGAATAATCGTTTAGTCGCTATTAAACGCTTCTCTAAACAGTCTTGGCCTGACGCTCAGCAGTTTATGGCAGAGGCAGCTGGAGTTGGTAAAGTGAGGCACAAGAGAATGGTGAATCTAATTGGTTGCTGTGCTGAAGGAGACGAACGGCTTTTGGTGGCAGAGTACATGCCAAACGATACATTATCAAAGCATCTCTTTCATTGGGACAAGCAGCCATTGCCATGGGAAATGCGTGTAAGAGTTGCATATCATGTAGCGCAGGCACTAGATCATTGTAGCATGGAAAATCGCAAAATATATCATGATTTGAATGCATACAGGATTCTTTTTGATGAGGAAGGTGACCCCCGATTTTCAAGTTTTGGGCTTATGAAAAATAGTCGAGATGGGAAAAGCTACAGTACCAACTTAGCATATACTCCACCTGAGTTTTTGCGGACAGGAAGGATCATTCCAGAGAGTGTAATCTACAGTTATGGAACAGTTCTTTTGGATCTTTTGAGCGGCAAGCATATTCCTCCAAGCCATGCTCTTGATCTGATTAGGGGTAAAAACGCCTTGTTGCTGATGGACTCGTCCCTAGAAGGGCAATATGCGAATGATGATGCTACAAAGTTGGTTGAACTTGCTTCAAAATGTCTTCAGTTTGAGGCTAGAGAACGCCCAGATATTAAGTTTCTTCTTACAGCAGTTGCACCTCTTCAAAAGCAGAAAGAGGTAGCATCTCATGTGTTGATGGGCCTGACTAAAAATACAGCGGTTCTACCAACCATGCTCTCACCCCTCGGAAAGGCATGTGCAAGGATGGATCTCACAGCTGTGCATGATATATTGCTAAAAACAGGTTATAAAGATGAAGAAGGTGCTGAGAATGAGCTTTCATTCCAAGAGTGGACACAACAAGTGCAAGAGATCTTAAACACAAAAAAATTTGGGGATATTGCATTCAGAGACAAGGATTTCAAGAACGCAATTGAGTATTATTCTAAGTTGGTGGTGATGATGTCAGTTCCTTCGGCCACCGTATTCGCGAGAAGAGCATTCTCCTACTTGATGAACGAGCAGGCTGAGCTGGCATTACGGGATGCAATGCAGGCACAGGTGTGCATTCCTGATTGGCCAACGGCATTCTACTTGCAGGCATTTGCTCTGACCAAGCTGGGAATGGAGACTGATGCTCAAGATATGCTTACTGATGGAGCTGGCTTTGAAGCCAAGAGATCTAACAGTTGGCGTGGTTAA 1485 0.4431 MGCLNSKTAYLHSPDDPFAFPDANKPDPANEDDVDQECQVPAFEEFGLNELRRATNEFSTNYIVSESGEKAPNVVYKGKLENNRLVAIKRFSKQSWPDAQQFMAEAAGVGKVRHKRMVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSMENRKIYHDLNAYRILFDEEGDPRFSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNALLLMDSSLEGQYANDDATKLVELASKCLQFEARERPDIKFLLTAVAPLQKQKEVASHVLMGLTKNTAVLPTMLSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQEILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRAFSYLMNEQAELALRDAMQAQVCIPDWPTAFYLQAFALTKLGMETDAQDMLTDGAGFEAKRSNSWRG 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0454 494 Pfam Protein tyrosine and serine/threonine kinase 74 309 IPR001245 GO:0004672|GO:0006468
Lele50g0454 494 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 30 489 IPR045845 GO:0004672|GO:0009742
Lele50g0454 494 MobiDBLite consensus disorder prediction 1 35 - -
Lele50g0454 494 Gene3D Phosphorylase Kinase; domain 1 32 136 - -
Lele50g0454 494 Gene3D Transferase(Phosphotransferase) domain 1 138 330 - -
Lele50g0454 494 SUPERFAMILY TPR-like 389 479 IPR011990 GO:0005515
Lele50g0454 494 ProSiteProfiles Protein kinase domain profile. 61 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0454 494 FunFam probable serine/threonine-protein kinase At4g35230 384 493 - -
Lele50g0454 494 FunFam probable serine/threonine-protein kinase At5g41260 138 329 - -
Lele50g0454 494 Gene3D Tetratricopeptide repeat domain 370 482 IPR011990 GO:0005515
Lele50g0454 494 SUPERFAMILY Protein kinase-like (PK-like) 48 312 IPR011009 -
Lele50g0454 494 FunFam probable serine/threonine-protein kinase At4g35230 33 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0454 Lele-ChrLele50 2600661 2604553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0454 5 313 Glycoside Hydrolase AT3G07070 33.434 1.04e-42 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lele50g0454 PK_Tyr_Ser-Thr 2.6e-27 CL0016