Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0451 ATGGGAAGCGGACTTTCCAGCCTCCTCCCTTGCTGCAAACCGGCTAACCGGACCACCAGCCAACCGGATCCACAGGAAGTGATCTTTGCCGCCACTGAGCCCTTGGACGAAACCCTAGGCCACTCCTTCTGCTACGTTAGATCTTCTGCTCGCTTTCTTTCCCCTACTCACTCGGATCGATTCGTCTCGCCTTCTAACTCCCTCCGTTTTTCTCCATCCCATGAACCCGTATCGAGAGCCCGACCCGATTTGCCCGAAACCGTCTTCAAGGCCATTTCTGGAGCTTCCGTCAGCGCCAATAGTTCCACTCCCAAGACTGTTTTCCAGCTGGACAATATCCCCGATGATGTTGCGGACTGTGTCGCTGGTGGCGGCGTGAGGGGAAACATTGTGAATGGCTTCGAGAGCACATCGTCGTTTAGTGCTCTCCCTCTTCAGCCAGTCCCCAGGGGGGGTGACCCCTCAGGTCCGATAGAGAGGGGAGCCTTCTTTCTGTCTGGCCCAATTGAGCGCGGCGCCCTCTCTGGGCCTCTCGAACCCAACGCCTCCACCGAAGGTGGAGGCGGCGTCCCTTTCTCGGCGCCTCTTGGTGGCTTTTATGTCAAAAAGAAGCGGAAGAGGGGCATTCCAGGGTTCCGGAAGGCTTTCCATGGGAACCTGTCGGAGAAGAAGCGGCCGTGGGTTGTGCCAGTGTTGAATTTCGTAGGAAGAAAGGATGTTCCGGCAAGCGAAGAGAAATCGGAGATAAAGAGTGAGAGTAATGTACAGTGGGCACTTGGGAAGGCGGGAGAGGATCGGGTACATGTAGTCGTCTCGGAAGAGCACGGCTGGTTGTTTGTTGGGATATATGACGGCTTCAATGGCCCTGACGCGCCGGAATTTCTGATGGGTCATCTTTATCGTGCAGTGTACAATGAATTGCAGGGTCTGTTTTGGGAATCTGAAGAAGCGGAGGAAACTAACCCATCGACCGCGCCTGCTGAGAATGCATTACTTAGAGAACAATCTGAACCATCGATTGAAATCTCCCACAGAAATTTAAAAAATGAGGGGGAAGTATCTGCGAGTGAGGACTTAAATTCTTTGCCGGTTGATCGAGAATCAGCAAAGAGGGTAACGTTTCAAGCAGACGGAACGGAAAGTAGGCGGCGTAGATTATGGGAGTTACTCGCCGAAGCGGATGCTGAAGACGGGCTTGATCTTTCAGGGTCAGATAGATTTGCATTTTCCGTTGATGATGCTCTGAGCGTAAGCAATGCTGGCTCTGCAGTTAGCAGACGATGGCTATTATTATCGAAGTTGAAACACGGATTATCAAAACATAAGGAGGGTCAAGGTAGCAAGTTGTTTCCCTGGAAACTCGGCACGGAAGATAAAGAGAAGGTTGAGGTAGAAAATCGGGCTGAGGAAAGGCCATCCCGTGGTAATAGGAGGCGGAAAGTGGGTCCCGTGGATCATGAGTCGGTTTTGAGAGCATTATCTAGGGCTCTTGAATTGACCGAACTTGCTTACTTGGATATGACGGATAAGATTCTTGATACAAACCCGGAGATCGCTTTAATGGGGTCATGTCTGTTAGCTGTTTTGATGAGGGATGAAGATGTGTACGTGATGAACGTGGGAGATAGCCGAGCCATTGTTGCACAGTATGAGCCCAAAGAGGTTAATTCGAGCGTGGAATTGGAGAGCAAAGGAGATAAGGGGTCAAGCACAGAGAGCATAGTTGAGGAGTCCTTAGCTCCTGGTGAAAGCACAAACAGGTCGGGGATTGAGGGTCCTGCTCAAGAAATGGGGTTGGTTGCATTGCAGCTGTCCACTGACCACAGCACAAGCATTGAAGAGAAGCTTTCTTACTTCACTACAGCCAAGTTTGGTTTGGGAACTATAAGTATATGCACTTGTTCCATTTCATTGCACGATGCTGCTGTATCTTTTCAATCCTTGCTCTACATTTCTTCCAGTCAGGAAGTCATTAGGATTAAGAATGAACATCCAGATGACAACCAATGCATTGTAAATGACAGAGTTAAAGGTCGTCTTAAGGTTACCAGAGCATTTGGGGCAGGATTTTTGAAACAGCCAAAGTGGAATGATCCTCTACTGGAAATGTTTCGTAATGAATATATTGGAACTGCTCCATATATATCCTGCTGTCCTTCGCTACGTCATCATAGATTATGCCCAAGAGATCAGTTCTTGATCCTCTCATCTGATGGGCTGTATCAATATCTAAGCAATCAAGAAGTGGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCTGATGGAGATCCTGCACAGCATTTGATTGAGGAGCTTCTCCTCCGTGCAGCGAAGAAAGCTGGAATGGATTTACATGACTTGTTGGATATCCCACAAGGAGATAGGAGGAAATACCATGATGATGTTACTGTCATGGTGATATCACTTGAAGGCCGAATCTGGAAATCATCAGGAAAGTATCTGTGA 2469 0.4872 MGSGLSSLLPCCKPANRTTSQPDPQEVIFAATEPLDETLGHSFCYVRSSARFLSPTHSDRFVSPSNSLRFSPSHEPVSRARPDLPETVFKAISGASVSANSSTPKTVFQLDNIPDDVADCVAGGGVRGNIVNGFESTSSFSALPLQPVPRGGDPSGPIERGAFFLSGPIERGALSGPLEPNASTEGGGGVPFSAPLGGFYVKKKRKRGIPGFRKAFHGNLSEKKRPWVVPVLNFVGRKDVPASEEKSEIKSESNVQWALGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPEFLMGHLYRAVYNELQGLFWESEEAEETNPSTAPAENALLREQSEPSIEISHRNLKNEGEVSASEDLNSLPVDRESAKRVTFQADGTESRRRRLWELLAEADAEDGLDLSGSDRFAFSVDDALSVSNAGSAVSRRWLLLSKLKHGLSKHKEGQGSKLFPWKLGTEDKEKVEVENRAEERPSRGNRRRKVGPVDHESVLRALSRALELTELAYLDMTDKILDTNPEIALMGSCLLAVLMRDEDVYVMNVGDSRAIVAQYEPKEVNSSVELESKGDKGSSTESIVEESLAPGESTNRSGIEGPAQEMGLVALQLSTDHSTSIEEKLSYFTTAKFGLGTISICTCSISLHDAAVSFQSLLYISSSQEVIRIKNEHPDDNQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDPLLEMFRNEYIGTAPYISCCPSLRHHRLCPRDQFLILSSDGLYQYLSNQEVVSQVESFMEKFPDGDPAQHLIEELLLRAAKKAGMDLHDLLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0451 822 Pfam Protein phosphatase 2C 652 778 IPR001932 -
Lele50g0451 822 Gene3D - 235 617 IPR036457 -
Lele50g0451 822 Gene3D - 650 817 IPR036457 -
Lele50g0451 822 ProSiteProfiles PPM-type phosphatase domain profile. 248 810 IPR001932 -
Lele50g0451 822 MobiDBLite consensus disorder prediction 1 23 - -
Lele50g0451 822 MobiDBLite consensus disorder prediction 557 571 - -
Lele50g0451 822 CDD PP2Cc 485 810 IPR001932 -
Lele50g0451 822 SUPERFAMILY PP2C-like 260 811 IPR036457 -
Lele50g0451 822 MobiDBLite consensus disorder prediction 557 591 - -
Lele50g0451 822 MobiDBLite consensus disorder prediction 572 591 - -
Lele50g0451 822 SMART PP2C_4 248 808 IPR001932 -
Lele50g0451 822 PANTHER PROTEIN PHOSPHATASE 2C 245 809 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0451 Lele-ChrLele50 2579851 2584804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0451 1 822 PP2C-type Phosphatase Gene Family AT2G35350 55.828 0.0 827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0451 50 2579851 2584804 Lele51g0432 51 2491600 2496568 hybridization
Lele50g0451 50 2579851 2584804 Lele52g0448 52 2647754 2652594 hybridization