Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0447 ATGGGAGGTGCGTCACTGCCACCGGGTTTTCGATTCCACCCGACTGATGAAGAACTAGTGGGATATTACCTGAAAAGAAAAGTGGAGGGGTTGGAAATTGAGCTTGAAGTTATCCCCGTCATTGACCTTTACAAATTTGATCCCTGGGAGTTACCTGAGAAATCATTCCTTCCAAAGAGAGATATGGAATGGTTTTTCTTCTGTCCCAGGGATCGAAAGTATCCGAATGGATCAAGAACAAACAGAGCAACCAAAGCTGGATACTGGAAAGCCACTGGAAAAGACAGAAAGGTCGTGTGCCAGCCATCTCCTTCCTCTGTCACCGGTTACCGCAAGACTCTGGTTTTCTATTGTGGAAGAGCTCCTTTGGGAGATAGAACCAACTGGGTCATGCACGAGTATCGCCTTTGTGATGATCTTGCCACAGGATCACCAAGTTTTCAGGGCGCTTATGCTCTGTGCCGAGTGATTAAGAAGAATGAGAAACCAAATGATTTGAAGGGAGAACACAATGGTAAAAAGGCTGGAAGCAGTTCTGTTAATGGGAATAAAACTTCAATGAGAATCTCAAATGAACCTTTGAACATTTCTGGTGATGTTTCGTCTCAAACAAGTCATCTGTACAATGAGAGTGGTCATTCAAGCCCTATTACTTCTCCCTCCAATGCGGTTCAGATGGCAGAGTTTGAGCAAGCTTCCGTGGAGACCAATCCTTCAGATATCTGGATCTCTCCAGATTTTATTCTTGATTCTTCAAAGGACTATCCTGAAGTACAAAATGCAGTGTCTGAATACTTTCCACAGTATGACTTATCAAGCTCAATGACCCCATGGCAGCCATTGGAACACCCAGAAATCTCACCCTCTTCATCGTACTCAAATTTGAATGGGGAAGTTGAATTTTCTGGCGATCTTAGTATGCCAACCTACATGGCAGAGGCAAACTTCATGAACTTCTATGGAAATGACCCTATGCCCTATGGAGGTTTTGGTCAGATCAATTCAACGTATCCGAGACATTTCTGA 1026 0.4386 MGGASLPPGFRFHPTDEELVGYYLKRKVEGLEIELEVIPVIDLYKFDPWELPEKSFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCQPSPSSVTGYRKTLVFYCGRAPLGDRTNWVMHEYRLCDDLATGSPSFQGAYALCRVIKKNEKPNDLKGEHNGKKAGSSSVNGNKTSMRISNEPLNISGDVSSQTSHLYNESGHSSPITSPSNAVQMAEFEQASVETNPSDIWISPDFILDSSKDYPEVQNAVSEYFPQYDLSSSMTPWQPLEHPEISPSSSYSNLNGEVEFSGDLSMPTYMAEANFMNFYGNDPMPYGGFGQINSTYPRHF 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0447 341 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Lele50g0447 341 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 221 - -
Lele50g0447 341 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
Lele50g0447 341 Gene3D NAC domain 15 164 IPR036093 GO:0003677|GO:0006355
Lele50g0447 341 MobiDBLite consensus disorder prediction 174 220 - -
Lele50g0447 341 MobiDBLite consensus disorder prediction 162 220 - -
Lele50g0447 341 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Lele50g0447 341 FunFam Nac domain-containing protein 86 15 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0447 Lele-ChrLele50 2565613 2567126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0447 1 309 NAC Transcription Factor Family AT4G17980 55.911 6.46e-112 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele50g0447 NAM 2.3e-38 No_clan