Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0446 ATGGTCCTGAAGTTCCATGCAAGCTTAGAAATGGCAATGGCTGGGAATGAGAGTGGCAGAATCACTGGGAATTGGAAGAAACATGTTCAGATAGTTGGTGAGAAACTGAAGAGGCTTCCGAGTTTGGCTTGGCAAACCATGTGGAAGGTGGGACGCGAAGACCCCAAAAGGGTGATCCATGCTTTAAAAGTGGGGTTGTCCCTAACCCTTGTTTCTCTGCTGTATCTGGTGGAGCCACTGTTCAAAGGGATTGGAAAGAATGCTATTATAGCTGTAATGACCGTGGTGGTTGTGCTTGAGTTCACAGCAGGCCAGTTTCTCTCGATTGGGGGACTGGGAACCCTTCTGGCAGGATCATTAGCATTGCTTATTCAGTATATTGCAAAATCATCCGGCCATGTCTTTAAAGCTATTTCTATTGGAGCTGCTGTTTTTCTTATAGGAGCTGCTGCTACTTATATGCGGTTCTTTCCCTACATAAAGAAGAACTATGACTACGGTGCAGTGATATTTCTCTTGACCTTTAATCTGATGACTGTATCGAGCTACCGAGTTGATAATGTATTGGCCATTGTACACGATCGCTTGGTCACCATAGTCATAGGCTGTGGCATCTGCCTTCTCATGAGTCTATTGATATTTCCAAATTGGTCAGGCGAAGACCTTCATAATTCCACGGTTTTCAAGCTTGAAGGCCTAGCCAATTCTATAGAAGTGTGTGTCAATGAATACTTCTATGGTGAAGTGGAAGCAAGTGAAGGCATAAAATCGTCCGAGGATCCTATTTACAAAGGTTATAAGGCAGCATTACATGCAAGTTGGGAGCCGAGGCATTCAATGTATTGTCACAGATTTCCATGTAAGCAGTATGTGAAAGTTGGAGCTGTTCTTCGTCAATTTGGGTATACAGTTGTTGCTTTGCATGGTTGTTTAAGAACTGAAATTCAGACGCCACGGTCTGTTCGAGCCATGTTCAAGGATCCCTGCATACGGCTTGTTGCAGAGGTGTCAAAAGTACTGATAGAACTAGCCAACAGCATAAGGAATCGCCGCCATTGCTCACCGGAAATACTCTCCGATCATCTTCATGAAGCCTTACAAGACCTCAACGCTGCAATAAAATCTCAGCCTCGTCTCTTCTTGGGATCCAATAATAACCGAGCAACCAACATGTTTGCTATAGCTGCAGCACAGGCAGGGCAGAAAATGCAGAAACACAGTAATGGAGTTTCACTATCAAGTGTTAAAACCGATTCTTCGGCATTGCTGGAATGGAAAACCAAAAGGATTTCTGCTGATCAGTCAAAGGACTCAGAACGAAAGACTCTAAGGCCCCAACTAAGTAAAATCGCGATCACTAGCGTTGAGTTCTCTGAAGCTCTTCCTTTTGCTGCTTTTGCTTCATTGTTGGTGGAGACAGTTGCAAAACTGGACTTTGTCATAGAGGAAGTTGAAGTACTGGGCAGATTAGCTTGCTTCAAAGAGTTCAAACCCGATGATGATGAGGTTGTTGTGACTTGTGAGAAACCCCGTGTTGATGTGACTCAAAACCATTTACCTTCTCACGGTGTTGATTGA 1578 0.4404 MVLKFHASLEMAMAGNESGRITGNWKKHVQIVGEKLKRLPSLAWQTMWKVGREDPKRVIHALKVGLSLTLVSLLYLVEPLFKGIGKNAIIAVMTVVVVLEFTAGQFLSIGGLGTLLAGSLALLIQYIAKSSGHVFKAISIGAAVFLIGAAATYMRFFPYIKKNYDYGAVIFLLTFNLMTVSSYRVDNVLAIVHDRLVTIVIGCGICLLMSLLIFPNWSGEDLHNSTVFKLEGLANSIEVCVNEYFYGEVEASEGIKSSEDPIYKGYKAALHASWEPRHSMYCHRFPCKQYVKVGAVLRQFGYTVVALHGCLRTEIQTPRSVRAMFKDPCIRLVAEVSKVLIELANSIRNRRHCSPEILSDHLHEALQDLNAAIKSQPRLFLGSNNNRATNMFAIAAAQAGQKMQKHSNGVSLSSVKTDSSALLEWKTKRISADQSKDSERKTLRPQLSKIAITSVEFSEALPFAAFASLLVETVAKLDFVIEEVEVLGRLACFKEFKPDDDEVVVTCEKPRVDVTQNHLPSHGVD 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0446 525 Pfam Aluminium activated malate transporter 48 488 IPR020966 GO:0015743
Lele50g0446 525 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 33 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0446 Lele-ChrLele50 2560880 2563009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0446 34 510 Miscellaneous Gene Families AT4G17970 62.193 0.0 632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0446 50 2560880 2563009 Lele53g0258 53 2144646 2149042 CCT
Lele50g0446 50 2560880 2563009 Lele54g0262 54 2214082 2218513 CCT
Lele50g0446 50 2560880 2563009 Lele56g1174 56 15207853 15208398 CCT
Lele50g0446 50 2560880 2563009 Lele50g0446 50 2560880 2563009 ECH
Lele50g0446 50 2560880 2563009 Lele51g0428 51 2468466 2470590 hybridization
Lele50g0446 50 2560880 2563009 Lele52g0444 52 2627610 2629712 hybridization