Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0439 ATGGCTGGTCTGGATTTAGGCACTGCTTCTCGCTTTGTTCAAAATCTTCACAGACCCGACTTGCACCTTCAGCCGCAGCCGCACCAACCTGATTCCGAAGAAGATGGCAATCGGGCTGGCCCCTTTTCTTCCGAAGAAGGTCCCCACCAAGGCCTCGAGCTCGCCTCAGCCTCCGCAGGTCCTGGCGACATCGTCGCCCGCCGTCCACGTGGCCGCCCTCCTGGTTCAAAGAACAAGCCGAAGCCACCCGTCATCATCACCAGAGAAAGCGCCAACACCCTCCGTGCTCATATTCTAGAAGTCGCCAGCGGCTCCGATGTGTTTGACTCCGTCGCCACCTACGCACGTCGCCGCCAGCGCGGGATCTGTATTCTGAGCGGTAGTGGCACCGTCACCAATGTGACCTTGAGGCAGCCGGCCGCCGCAGGATCCGTGGTCACCCTTCACGGAAGGTTCGAGATATTGTCGCTGTCGGGGTCGTTCCTCCCACCGCCGGCCCCGCCAGGTGCGACGAGCCTGACTGTGTACTTGGCCGGTGGGCAAGGACAAGTTGTGGGAGGATGTGTGGTGGGAGAGTTGACGGCAGCTGGACCGGTCATGGTGATCGCATCTTCGTTCACGAACGTAGCGTACGAGAGGTTGCCTCTGGATGAGCAGGAGGAGCAACTCCAGATGCAACCACCCGTGGCTTCTTCTCAAGGATCGGCGGCGGCGACAGCTTTCCCGGACCCATCCTCCGGTCTACCCTTCTTCAATTTGCCCCTTAATATGCAGATTCCTGTGGAAGGCTGGGCCGGCAACTCAGCCCCTCGTCCTCCATTTTGA 825 0.6012 MAGLDLGTASRFVQNLHRPDLHLQPQPHQPDSEEDGNRAGPFSSEEGPHQGLELASASAGPGDIVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVASGSDVFDSVATYARRRQRGICILSGSGTVTNVTLRQPAAAGSVVTLHGRFEILSLSGSFLPPPAPPGATSLTVYLAGGQGQVVGGCVVGELTAAGPVMVIASSFTNVAYERLPLDEQEEQLQMQPPVASSQGSAAATAFPDPSSGLPFFNLPLNMQIPVEGWAGNSAPRPPF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0439 274 Gene3D - 94 227 - -
Lele50g0439 274 SUPERFAMILY AF0104/ALDC/Ptd012-like 91 223 - -
Lele50g0439 274 CDD DUF296 95 178 IPR005175 -
Lele50g0439 274 FunFam AT-hook motif nuclear-localized protein 94 222 - -
Lele50g0439 274 ProSiteProfiles PPC domain profile profile. 91 228 IPR005175 -
Lele50g0439 274 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 33 230 IPR014476 GO:0003680
Lele50g0439 274 MobiDBLite consensus disorder prediction 1 84 - -
Lele50g0439 274 Pfam Plants and Prokaryotes Conserved (PCC) domain 95 208 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0439 Lele-ChrLele50 2513244 2514068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0439 1 274 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 65.116 1.96e-100 293