Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0432 ATGGCCGAAAGAAAACGAAGGGAGAAGCTCACCCAGAGGTTTATTGCTCTTTCCGCCATTCTTCCTGGCCTCAAAAAGGTAAACAAGAAAGCAGTGGAAACCGCGGTGTTTGTGAACAGGTCTGTTCTCCATGCCGACGACGATGGCTCCTCCTCCGATGAAAATTCCAACAGCGGCTCTGTCCAGCCGCTGCCCGAAATCGAAGCAAGAGTTTTGGGCAGGGAGAGTAGCAGCTTCTTGCCTTTCGGGAATACCACTCTTGATGCTACAGTTGTTGCTCAAGTAAATTTATTTTTAAATGAAGAAGGAAGAGTGCGTGACAGCAAAAGATATAGTAAGAAGCCTGAGGAAGGGTCTGAAGCACTTAATTTGATGATTAGTTGGAGAAGTGTCCGTGCTTCGTCGTAG 408 0.473 MAERKRREKLTQRFIALSAILPGLKKVNKKAVETAVFVNRSVLHADDDGSSSDENSNSGSVQPLPEIEARVLGRESSSFLPFGNTTLDATVVAQVNLFLNEEGRVRDSKRYSKKPEEGSEALNLMISWRSVRASS 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0432 135 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 30 IPR036638 GO:0046983
Lele50g0432 135 MobiDBLite consensus disorder prediction 45 64 - -
Lele50g0432 135 PANTHER BHLH TRANSCRIPTION FACTOR 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0432 Lele-ChrLele50 2472786 2473566 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0432 1 95 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22760 33.121 4.28e-14 65.5