Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0408 ATGTTGTCCACTCTCTCACCTTCCCACCCTTTCCTCGGGAACCCTTTCTCCGCCTTTGACGGCGGCCTCACGTCGTGGGAGTTCCCGGACCTTTCCTCTGTCTTGAATCCCATCGACCCCATCACTAATTCAAGTTCCGGCTCTGACGAACAGGATCAAATCCATGCCAAGAGAAAATCCCCCGGCTCGGATGACCAAACGGACCGTCTGGATGCCGTCATGGAGAACCGAAAGCGGAGACGGATGATATCGAACCGGGAGTCGGCGAGACGTTCGCGTATGCGTAAACAGAGGCATCTAGAGAACTTACGGAACCAGGTGAACCGGTTTAGGATGGAAAACCGAGACCTGAACAACCGGATGCAGTTCTTGCTTCACCTCACTAGATGTGCACGAACCGAAAACGAATGGCTCCGGTACGAGCGAACCATGCTCCTGCAAAAACTGTCGACCCTAACTCAATATTTGGTGTTCCAACAACTGCAACCCGTCTCATCTGCATGGCCATGCAACACTAGCATGACAGACAGAATAAAGCTTGACCGTATTAACTAA 555 0.5207 MLSTLSPSHPFLGNPFSAFDGGLTSWEFPDLSSVLNPIDPITNSSSGSDEQDQIHAKRKSPGSDDQTDRLDAVMENRKRRRMISNRESARRSRMRKQRHLENLRNQVNRFRMENRDLNNRMQFLLHLTRCARTENEWLRYERTMLLQKLSTLTQYLVFQQLQPVSSAWPCNTSMTDRIKLDRIN 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0408 184 PANTHER BZIP TRANSCRIPTION FACTOR 44 41 176 - -
Lele50g0408 184 FunFam BZIP transcription factor 75 126 - -
Lele50g0408 184 Pfam bZIP transcription factor 76 122 IPR004827 GO:0003700|GO:0006355
Lele50g0408 184 MobiDBLite consensus disorder prediction 51 68 - -
Lele50g0408 184 MobiDBLite consensus disorder prediction 37 68 - -
Lele50g0408 184 CDD bZIP_plant_GBF1 78 129 IPR045314 GO:0003700|GO:0006355
Lele50g0408 184 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 80 95 IPR004827 GO:0003700|GO:0006355
Lele50g0408 184 Gene3D - 76 131 - -
Lele50g0408 184 Coils Coil 86 120 - -
Lele50g0408 184 SMART brlzneu 73 137 IPR004827 GO:0003700|GO:0006355
Lele50g0408 184 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 75 124 IPR004827 GO:0003700|GO:0006355
Lele50g0408 184 SUPERFAMILY Leucine zipper domain 77 126 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0408 Lele-ChrLele50 2281080 2281634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0408 1 162 bZIP Transcription Factor Family AT2G22850 34.419 1.41e-24 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele50g0408 bZIP_1 4e-08 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0408 50 2281080 2281634 Lele51g0393 51 2251974 2254325 hybridization
Lele50g0408 50 2281080 2281634 Lele52g0407 52 2382361 2384658 hybridization