Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0389 ATGGATACATTGTTTAGGGTCGTCAATTTTCAACATCAACCTCAACCTGATCAATCCCTCAACTCCACCACCAGCCTCACTTCTAGCAGCTCCAGATCTTCCAGACAGAACTGCAACCCCCCACCTCAAGACGAAGAATGCTTCAACCTTTTCATGGATGAAGAAGATTTGTCCTCGTCTTCTTCTAAGCACTACTATCCCTGTCTCCCGGCCCATCCTTCCTCCACTACCACCCCCACTAACACCGCCGATTTCTCCTTCTCACCCTCCGCTGACTTCAACTTGGAATTATCGGCCGGCAACGGCAAGTGGGCTTCCGATATCATCCTCGAAACAGCTCGTGCCATTGCTGATATGAACAGAGCTCGTATCCAGCAACTCATGTGGATGCTCAACGAACTCGCCTCCCCTTATGGCGACACTTATCAGAAACTTGCGTCTTACTTTGTCCAAGCCTTGTTCGCCCGCATGACCGATTCAGGCCTTCGCACCTACCGTTCCTTAACCTGCACATCGGACAAAACCTGCTCTTTTGAATCGACAAGGAAGACAGTCTTGAAGTTCCAGGAGGTCAGCCCTTGGACTACCTTCGGTCACGTCGCTTCCAATGGCGCCATATTGGAAGCCCTTGAAACTGAGCCTAAATTACATATACTCGATTTCAGCAACACGTATTGCACCCAATGGCCTACCCTTTTAGAGTCCTTGGCCACTCGCACTGACGAAGCCCCGCATCTCCGTTTAACCACCATCGTCACCAGCCGACCTGGTGGTTCCGATGCGGCAGTTCAAAAAGTCATGAAGGAAATAGGTGCTAGGATGGAGAAATTCGCGCGTCTCATGGGTGTACCCTTCAAATTCAACGTCATCCATCATACCGGTGATCTTTCAGAGTTGAACTTTGTGGAATTAGATATTAAAGATGACGAGGCTTTAGCTATAAACTGTGTGAACGCTTTGCATTCTGTCTCAGTTGTGGGTAATGGTAATCATCGTGACGCGTTGATATCCTCGTTTCGGAGATTACAACCTAGAATAGTTACGATAGTGGAAGAAGAAGCTGATCTTGATGTTGGGTATGACGGTTTTGAGTTTTTGAACGGGTTTGAAGAATGCTTGAGGTGGTTTAGGGTTTATTTTGAGGCGTTGGAGGAGAGCTTCCCGAAGACGAGCAACGAAAGGCTCATTCTTGAGAGGCGGGCAGGACGAGCGATGGTTGACTTGGTGGCTTGTGATCCATCGGAGTCGGTGGAGCGGCGGGAAAGGGCGGGACGGTGGTCGCAGCGTATGCATGGGGATGGGTTCAATGCGGCGTCGTTTAGCGACGAGGTATGTGACGATGTGAGAGCGCTGCTGAGAAGGTACAAGGAGGGATGGTCAATGACACAGTGCTCCCACGCCGGAATATTCTTGTCGTGGAAGGAACAGCCGGTGGTGTGGGCCAGTGCATGGAGGCCATGA 1461 0.5038 MDTLFRVVNFQHQPQPDQSLNSTTSLTSSSSRSSRQNCNPPPQDEECFNLFMDEEDLSSSSSKHYYPCLPAHPSSTTTPTNTADFSFSPSADFNLELSAGNGKWASDIILETARAIADMNRARIQQLMWMLNELASPYGDTYQKLASYFVQALFARMTDSGLRTYRSLTCTSDKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALETEPKLHILDFSNTYCTQWPTLLESLATRTDEAPHLRLTTIVTSRPGGSDAAVQKVMKEIGARMEKFARLMGVPFKFNVIHHTGDLSELNFVELDIKDDEALAINCVNALHSVSVVGNGNHRDALISSFRRLQPRIVTIVEEEADLDVGYDGFEFLNGFEECLRWFRVYFEALEESFPKTSNERLILERRAGRAMVDLVACDPSESVERRERAGRWSQRMHGDGFNAASFSDEVCDDVRALLRRYKEGWSMTQCSHAGIFLSWKEQPVVWASAWRP 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0389 486 Pfam GRAS domain family 108 485 IPR005202 -
Lele50g0389 486 MobiDBLite consensus disorder prediction 12 43 - -
Lele50g0389 486 MobiDBLite consensus disorder prediction 12 44 - -
Lele50g0389 486 ProSiteProfiles GRAS family profile. 96 485 IPR005202 -
Lele50g0389 486 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 106 475 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0389 Lele-ChrLele50 2191978 2193438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0389 1 486 GRAS Transcription Factor Family AT4G37650 59.480 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele50g0389 GRAS 5.5e-105 CL0063