Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0377 ATGAAAGCTCATCATTTGAGCTTCTTTTTTATCATATTCTTGTCTCCATCCCTCATTGTCGCCACTGCAAAAGGGGTCAATACCACCCAATTCCTCACTGTCAATGAATCTCAGCCAAGAAGAATTCTGCACCAACCATTGTTTCCGGCGACTTCTGCACCACCGCCAGGCACCGACTCGCCTCCACCACCGCCACCTTACAATACTCCACCTTCTCCCGACACCGGCATTCCCTTCTTTCATGAGGATCCTGCGGGGCCGCCTCCAAATCAGAACCAGCCACCACCTTCGATTCCCAATGCCACAATTGCGAACCCAACAGCAACACAACCAACCAAGCCAACAAAGAAGGTCGCAATTGCAATCTCTGTCGGAATTGTCACTCTTGGCATGCTCTCGGCTCTTGCCTTCTTCCTGTACAGGCATCGGGTGAGGCAACCCATCGAGACTCAGAAGCTCGTCGGTGGCAATTCTCAGAGGATCCCTGATGATCCAAGGGTGCCACCATCGAGCTTTCTCTACATTGGGACCGTGGAACCAAGCCGAACGTCAGTGACCGACGCGAGTGAGACCAATGGTGCAAACAGGTCTCCTTATCACAAGCTCAATTCTATCAATCGATCCGAAAGATACCGTCCCAGTCCTGAATTGCAGCCATTGCCGGCGTTGAGTAAGCCTCCAGATGGGAATTACCCACCGGTGGTGTCTTCGTCATCCTCCGACGACGAGGAAAGCCACGAGACCGTGTTTCATTCGCCACAGGGGTCATCATTGAGTTACGAGGATAGCTATTACACCCCAGTTTCGCGTCATAGTTCTCTGGCTAATGGTGGCAAGTCGGCTTCTCTCAGGAGTGAGACCTATTCCGCTACTTCAATCCCCCATTCAAAGAGAACTTCACCGAAATCTCGGCTTGCGGCTTCATCGCCGGATATTAGGCAAGTCCTTATCCCACCCATTAAGCAGGCTCCGCCTGTGACGGCACCTGCTCCACCCCCGCTGGCACCACCACTTTCACAACCGTATCAGCAACAGGACAAAGAAGTGGCTAACGGTCATTCCAGGAGACCGAAATTCTCAGCGCCTCCGCCAGCGCCTAATTTGCGGTGTCTTCAGTCAACTAACACCGCACCCCAAAACATATCTAGAACTTCCCTCCATCCTCCTCCTCCTCCCCCACCGCCTCCGCCTCCGCCTCCACCACGGCAATTGACGCCGCGGAAAGCAGGGTCTCCAGCAACCAGCGTTTCCTCATCCTCCGCAACAAGGCACCGACAATCTTTCCCTCCAAACCAAGGAGCCGGTTCTGCGAATAGTGTAACACAATCTTCAGAAAATGGTGATAAAAGTCACAGCTCTTCTGGGAGGCTTGAAGCCGATGGCACGGAGGGTGCAAAACCCAAGTTAAAGGCTCTGCATTGGGATAAAGTACGAGCGACTTCAGACCGCGCGACAGTGTGGGACCAACTAAAATCAAGCTCATTTCAATTAAACGAGGACATGATGGAATCCTTGTTTGGCTGCAATTCCCAGAAACCCGCCCCTAAAGAGCCCATTCGAAGATCAGTTCTTCCACCTGTTGAACAGGAGAACAGAGTATTAGACCCCAAGAAGTCTCAAAACATAGCTATACTTCTAAGGGCACTGAATGTGACAAGAGATGAGGTGTCTGACGCCCTTCTAGATGGGAATCCTGAAGCGTTGGGTGCAGAACTTTTGGAAACTTTAGTAAAAATGGCTCCCACTAAGGAGGAAGAAATAAAACTAAAAAACTATAGTGGTGACCTCTCTAAACTAGGGTCAGCTGAAAGATTTCTTAAACAGGTGCTTGATATCCCTTTTGCGTTCAAAAGAGTTGAAGCCATGCTATATAGAGCCAACTTTGATGCAGAAGTTAATTACCTGAGGAAGTCTTTTCAAACCCTTGAGGTAGCAAGTGAGGAATTGAAAAATAGCCGGCTGTTCCTCAAACTTCTTGAAGCTGTTCTCAGGACAGGAAACCGAATGAATGTGGGCACCAATCGAGGTGATGCTAAAGCTTTTAAGCTGGACACGCTCTTAAAACTTGTAGACATAAAGGGAACAGATGGAAAGACTACATTGCTTCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGTGCAAATAGCGGTTCAGTAAATGGAAATGTTCAGAACCAAGTGAATTCCAAATTCAGTGAGGACGAATTCAAGAAGCAAGGATTGCAGGTTGTGGCTGGGCTCAGTAGGGACCTCAGCAATGTCAAAAAAGCGGCAGGAATGGATTCTGATGTCTTAAGCAGCTACGTCTCAAAACTTGAAAAGGGTCTTGATAAAGTGAGAGTGGCTTTGCAACATGAGAAGCCGGATCTGCAAGGGAATTTCTTCCACTCCACGAAGCTATTTCTGAAAAATGCTGAAGATGAAATCGTTAGAATTACGGCGGATGAACGAAAGGCCTTATTTCTTGTGAAAGAAGCTACAGAATACTTTCACGGGAATGCGGCCAAGGAAGAAGCCCACCCTCTCAGAATCTTTATGATTGTTAGGGATTTCCTAAATATCTTGGACCAGGTATGCAAAGAAGTGGGAAGGATGCAGCAGGATAGAACCGTGATTGGTTCTTCCAGATCCTTCCGGATAGCTGTAAGTGCATCATTACCAGTTCTAAACACGTACAATGCGAAACAAGATAGAAGTTCAGATGAAGAAAGCTCGTCACCCTAG 2727 0.4837 MKAHHLSFFFIIFLSPSLIVATAKGVNTTQFLTVNESQPRRILHQPLFPATSAPPPGTDSPPPPPPYNTPPSPDTGIPFFHEDPAGPPPNQNQPPPSIPNATIANPTATQPTKPTKKVAIAISVGIVTLGMLSALAFFLYRHRVRQPIETQKLVGGNSQRIPDDPRVPPSSFLYIGTVEPSRTSVTDASETNGANRSPYHKLNSINRSERYRPSPELQPLPALSKPPDGNYPPVVSSSSSDDEESHETVFHSPQGSSLSYEDSYYTPVSRHSSLANGGKSASLRSETYSATSIPHSKRTSPKSRLAASSPDIRQVLIPPIKQAPPVTAPAPPPLAPPLSQPYQQQDKEVANGHSRRPKFSAPPPAPNLRCLQSTNTAPQNISRTSLHPPPPPPPPPPPPPPRQLTPRKAGSPATSVSSSSATRHRQSFPPNQGAGSANSVTQSSENGDKSHSSSGRLEADGTEGAKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMESLFGCNSQKPAPKEPIRRSVLPPVEQENRVLDPKKSQNIAILLRALNVTRDEVSDALLDGNPEALGAELLETLVKMAPTKEEEIKLKNYSGDLSKLGSAERFLKQVLDIPFAFKRVEAMLYRANFDAEVNYLRKSFQTLEVASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGANSGSVNGNVQNQVNSKFSEDEFKKQGLQVVAGLSRDLSNVKKAAGMDSDVLSSYVSKLEKGLDKVRVALQHEKPDLQGNFFHSTKLFLKNAEDEIVRITADERKALFLVKEATEYFHGNAAKEEAHPLRIFMIVRDFLNILDQVCKEVGRMQQDRTVIGSSRSFRIAVSASLPVLNTYNAKQDRSSDEESSSP 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0377 908 MobiDBLite consensus disorder prediction 408 450 - -
Lele50g0377 908 MobiDBLite consensus disorder prediction 451 468 - -
Lele50g0377 908 PANTHER FORMIN-RELATED 9 902 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele50g0377 908 SUPERFAMILY Formin homology 2 domain (FH2 domain) 390 869 - -
Lele50g0377 908 Pfam Formin Homology 2 Domain 465 856 IPR015425 -
Lele50g0377 908 MobiDBLite consensus disorder prediction 250 307 - -
Lele50g0377 908 MobiDBLite consensus disorder prediction 384 406 - -
Lele50g0377 908 MobiDBLite consensus disorder prediction 49 73 - -
Lele50g0377 908 ProSiteProfiles Formin homology-2 (FH2) domain profile. 459 882 IPR015425 -
Lele50g0377 908 SMART it6_source 459 871 IPR015425 -
Lele50g0377 908 MobiDBLite consensus disorder prediction 367 383 - -
Lele50g0377 908 Gene3D Formin, FH2 domain 458 868 IPR042201 -
Lele50g0377 908 MobiDBLite consensus disorder prediction 82 101 - -
Lele50g0377 908 MobiDBLite consensus disorder prediction 322 339 - -
Lele50g0377 908 MobiDBLite consensus disorder prediction 176 211 - -
Lele50g0377 908 MobiDBLite consensus disorder prediction 47 115 - -
Lele50g0377 908 MobiDBLite consensus disorder prediction 154 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0377 Lele-ChrLele50 2146479 2150176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0377 32 898 FH2 protein (formin) Gene Family AT5G67470 57.625 0.0 863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0199 53 1663091 1666959 Lele50g0377 50 2146479 2150176 CCT
Lele54g0203 54 1744947 1751180 Lele50g0377 50 2146479 2150176 CCT
Lele55g1286 55 19337335 19341211 Lele50g0377 50 2146479 2150176 CCT
Lele56g1235 56 15691696 15697320 Lele50g0377 50 2146479 2150176 CCT
Lele50g0377 50 2146479 2150176 Lele50g0377 50 2146479 2150176 ECH
Lele50g0377 50 2146479 2150176 Lele51g0367 51 2110602 2114278 hybridization
Lele50g0377 50 2146479 2150176 Lele52g0380 52 2235899 2239563 hybridization