Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0371 ATGCAAGAAGTCTTTGCCGTGCAACTGCCCCACGAACGCCGCCTGCGACCACCGTCACAACCTGACACCCTGGCGCACAAGATTGGAAAGTCAACTCGCCGCCCAGGCGCCCCCTCCAAGGCGAGGGTTTATGCTGACGTCAATCTCATCCGTCCCAAGGAATACTGGGACTACGAGTCCCTAACCGTCCAGTGGGGGGAGCAGGATGATTACGAGGTAGTCAAGAAGGTGGGAAGAGGGAAATACAGTGAGGTTTTCGAGGGTGTTCACTGCACCGACAATGAAAAATGCATCATCAAGATTCTTAAACCAGTCAAGAAGAAGAAGATCAAGAGGGAGATCAAAATACTGCAGAATCTTTGTGGGGGGCCTAATATTGTGAAATTGATTGATATTGTTAGAGACCAGCAATCAAAGACTCCAAGCCTAATCTTTGAACATGTTAATAACACTGATTTCAAAGTTCTCTATCCTACACTGTCAGACCATGATATACGATTTTACATTTATGAACTTCTAAAGGCATTGGATTATTGCCACTCACAAGGCATCATGCACCGGGATGTGAAGCCACATAATGTAATGATTGACCATGAACAGCGTAAGCTTCGTTTGATAGATTGGGGACTGGCAGAGTTTTATCATCCTGGCCAAGAATATAATGTCCGTGTGGCATCAAGATATTTTAAAGGCCCTGAGCTCCTTGTTGACCTTCAAGATTATGATTACTCTTTAGATTTGTGGAGCCTTGGTTGCATGTTAGCTGGAATGATATTCCGTAAGGAGCCATTCTTTTATGGACATGATAATTATGACCAGCTAGTCAAAGTTGCAAAGGTACTTGGGACAGATGAATTAAATGCATATCTGAGCAAGTATCGCATAGAGTTGGACCCAAATCTTGCTGCACTTGTTGGGAGGCATAGCCGGAAACCTTGGGAAAAGTTCATTAATCTTGACAATCAACACTTGGCTGTTCCTGAGGCTGTTGACTTTGTTGACAAGCTACTGCAGTATGATCAGCAAGACCGTCCTACTGCCAAAGAAGCCATGGACCATCCCTACTTCAATCCAGTCAGAAATGCAGAAAGTAGCCGAAATCGTAGGCACTGA 1113 0.4483 MQEVFAVQLPHERRLRPPSQPDTLAHKIGKSTRRPGAPSKARVYADVNLIRPKEYWDYESLTVQWGEQDDYEVVKKVGRGKYSEVFEGVHCTDNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLIDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDHDIRFYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMLAGMIFRKEPFFYGHDNYDQLVKVAKVLGTDELNAYLSKYRIELDPNLAALVGRHSRKPWEKFINLDNQHLAVPEAVDFVDKLLQYDQQDRPTAKEAMDHPYFNPVRNAESSRNRRH 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0371 370 Gene3D Phosphorylase Kinase; domain 1 124 147 - -
Lele50g0371 370 Gene3D Phosphorylase Kinase; domain 1 62 120 - -
Lele50g0371 370 SMART serkin_6 71 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0371 370 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Lele50g0371 370 MobiDBLite consensus disorder prediction 14 38 - -
Lele50g0371 370 FunFam Casein kinase II subunit alpha 57 147 - -
Lele50g0371 370 FunFam Casein kinase II subunit alpha 148 359 - -
Lele50g0371 370 Gene3D Transferase(Phosphotransferase) domain 1 148 357 - -
Lele50g0371 370 Pfam Protein kinase domain 71 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0371 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Lele50g0371 370 ProSiteProfiles Protein kinase domain profile. 71 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0371 370 SUPERFAMILY Protein kinase-like (PK-like) 43 360 IPR011009 -
Lele50g0371 370 PANTHER CASEIN KINASE II SUBUNIT ALPHA 35 365 IPR045216 GO:0004674|GO:0006468
Lele50g0371 370 CDD STKc_CK2_alpha 52 356 IPR045216 GO:0004674|GO:0006468
Lele50g0371 370 MobiDBLite consensus disorder prediction 347 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0371 Lele-ChrLele50 2103591 2109230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0371 69 357 Core Cell Cycle Gene Families AT1G76540 30.063 1.17e-41 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Lele50g0371 Pkinase 9e-66 CL0016