Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0365 ATGACGCAATTCACACCTTCTCTTCCTTCTTTTCACCAAATCACCACCCCTTTCTCCGTCCTTGCCATGAACAAGAATAATCAAATTCCCAAGACCCGAACTTGGCCCGGGTTCCCTTCCTCCAAGGCCTTCAATTCCTTCGGTGATGCTAACTGCATGGAACAGTTACTTGTTCACTGCGCCAACGCCATCGAATCCAACGACGTCACTCTTGCCCAGCAGATCCTCTGGGTTTTGAATAACATCGCTCCCCCCGACGGCGACTCCAATCAACGCCTGGCCTCCGCCTTCAATCGAGCTCTCGCCGCCCGTGCTGCCAAATCCGGCAGCTGCAAGATGCTTGCTGTGGTGGCGGACGCTCACACCAACCTCGCCGCTTTAGACATCCACAACTTCTCCGTCGTCGAGCTCGCCAACTTCGTCGACTTAACCCCCTGGCACCGATTCGGCTTCACTGCGGCTAACTCGGCCATTCTAGAAGTTACCGAGGGATATTCAGTTATTCACATCGTCGACTTGAGCTCCACGCATTGCATGCAGATTCCTACGCTCATCGACGCTATCGCTACCCGCCATGAGGTCCCTCCTTTAATCAAGCTCACAGTAGCTGGTTCTAACAACGACATCCCGCCAATTCTTAACCTTTCCTACGACGAATTAGGCTCCAAGCTGGTCAGCTTCGCGAGGTCTAAGAACATGATATTGGAATTCAAAGTGATTTCCTCGAGTTATAAAGACGGGTTCGCTGCTCTGATCGAACACCTTCGGGTGCAACAGATGGTTTTGGCGGCAGAAGGTCACAGAAGGGAAGCTTTGGTGATAAACTGTCACATGATGCTCCATTACATCCCCGACGAAACCCTATCCACAGTACTAACCCCCGAATCAGACCATTCAATTTCAATCTCTTACGTTTACGAGTCATCGTCGATGCGATCCATGTTTCTGAGAGCTGTGCGGAGCTTAGAGCCGACGATTGTGGTATTAGTGGACGAAGACGCGGATTTGATATCGAACAATCTGGTGAGCAGGGTGAGGTCTGCGTTTAACTACCTGTGGATACCGTACGACACGGTGGACACGTTCTTGCCGCGAGGGAGCCGTCAACGGCAATGGTACGAGGCGGATATAAGCTGGAAGATAGAGAACGTGATTGCGCAGGAAGGGTTACAGAGGGTGGAGAGGGTGGAGCCGAAGAACATGTGGGAGCAAAGGATGAGGAATGCCAAGTTTCTAGGGGTTGGGTTGAGTGAAGAAGGGGTTTCAGAGGTGAGGACGATGCTTGACGAGCATGCAGCAGGGTGGGGATTGAAGAAGGAGGACCAACATCTTGTTCTTACCTGGAAAGGACACAACGTTGTTTTTGCCTCTATTTGGATGCCTGCTTGA 1389 0.5162 MTQFTPSLPSFHQITTPFSVLAMNKNNQIPKTRTWPGFPSSKAFNSFGDANCMEQLLVHCANAIESNDVTLAQQILWVLNNIAPPDGDSNQRLASAFNRALAARAAKSGSCKMLAVVADAHTNLAALDIHNFSVVELANFVDLTPWHRFGFTAANSAILEVTEGYSVIHIVDLSSTHCMQIPTLIDAIATRHEVPPLIKLTVAGSNNDIPPILNLSYDELGSKLVSFARSKNMILEFKVISSSYKDGFAALIEHLRVQQMVLAAEGHRREALVINCHMMLHYIPDETLSTVLTPESDHSISISYVYESSSMRSMFLRAVRSLEPTIVVLVDEDADLISNNLVSRVRSAFNYLWIPYDTVDTFLPRGSRQRQWYEADISWKIENVIAQEGLQRVERVEPKNMWEQRMRNAKFLGVGLSEEGVSEVRTMLDEHAAGWGLKKEDQHLVLTWKGHNVVFASIWMPA 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0365 462 ProSiteProfiles GRAS family profile. 44 460 IPR005202 -
Lele50g0365 462 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 52 448 IPR005202 -
Lele50g0365 462 Pfam GRAS domain family 53 459 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0365 Lele-ChrLele50 2080180 2081568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0365 23 461 GRAS Transcription Factor Family AT3G49950 56.335 1.21e-174 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele50g0365 GRAS 1.2e-90 CL0063