Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0356 ATGAAATATGAAGCTCATCCCTTTGCCCAAAATTGCGAGGCAGAGAAGCTAAAAGCAGTGTTCGGTGTTTTCTTGAAGCTCTACGATAATTACAATACGAGGTTTGTGATAAGAGTGAAGAAAGGGAACAAAAGAAGGTACAAGACAGGCACGGCACAGTATTTTCCTACACCATTCGCCAACACCGTTGGGTTTTCAGGGTTTCCTCCTACGCTACCAGACATGGGAGGAGGCAATGGGCAAAAGTCGAAGATGGCTCGGGAGAGGAACATGGAGAAGAATAAGGCTGCAAAGGGGAGCCAGCTGGATTCAAACAAGAAAGCGATGAGCATCCAGTGCAAGGTGTGCATGCAAACTTTTATCTGCACCACATCGGAGGTGAAGTGCAAGGAGCATGCTGAAGCCAAACACCCAAAGTCTGATCTTTATACTTGCTTTCCTCATCTTAAAAAGTGA 456 0.4583 MKYEAHPFAQNCEAEKLKAVFGVFLKLYDNYNTRFVIRVKKGNKRRYKTGTAQYFPTPFANTVGFSGFPPTLPDMGGGNGQKSKMARERNMEKNKAAKGSQLDSNKKAMSIQCKVCMQTFICTTSEVKCKEHAEAKHPKSDLYTCFPHLKK 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0356 151 Gene3D - 71 151 IPR026939 -
Lele50g0356 151 Pfam Zinc-binding 112 149 IPR039438 -
Lele50g0356 151 SUPERFAMILY Expressed protein At2g23090/F21P24.15 74 150 - -
Lele50g0356 151 MobiDBLite consensus disorder prediction 77 103 - -
Lele50g0356 151 MobiDBLite consensus disorder prediction 85 100 - -
Lele50g0356 151 PANTHER OS07G0114300 PROTEIN 75 151 IPR039713 -
Lele50g0356 151 Pfam 4F5 protein related disordered region 77 109 IPR007513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0356 Lele-ChrLele50 2039847 2042098 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0183 53 1524638 1525294 Lele50g0356 50 2039847 2042098 CCT
Lele54g0186 54 1584662 1585318 Lele50g0356 50 2039847 2042098 CCT
Lele55g1302 55 19477412 19478068 Lele50g0356 50 2039847 2042098 CCT
Lele56g1250 56 15841263 15842129 Lele50g0356 50 2039847 2042098 CCT
Lele50g0356 50 2039847 2042098 Lele50g0356 50 2039847 2042098 ECH
Lele50g0356 50 2039847 2042098 Lele52g0362 52 2120908 2125134 hybridization