LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele50g0335	ATGAATTCTACTCCTACTGTACTCTCTTCCAAGAGTACACGACAAACGAAGTTCTTCTCCACCTATAAACTTCCCTCGCCTACCCTCGGTCTAACTCGCAACGCGCCATTGCATACATTGGATCATAAATTTTATATTCAGGTCCACAGAGAGATTACCAATACAGAAAGCGGTCGGGTTTTCTCGGGTTATTCTTCTCTTTCCCTATCCTTTCCGAAACAGAGTAGCGTCGAGGCAGCAAGCTCACTGTCATCGGACATATCTCCTATCTATCAAAAGGCAAGGGTCTTCCAACAGAAATTCTCGTACGACTTCCCAATCGATACTTCTGGCTCATATCTGGTACGCCTTCATTTCTTTGCTTTCTCTTCCTCAAGTAATCTCTCAACTGCTCGCTTCAATGTTTCGGTTCGTGGGTTCTGGCTCTTGCAAAACTTCTCTGCCAAAAATGCTAGCAATTCTCCTTTAGTAAAAGAATTCTTCATAAGCATCGATGCCACCGGCTTCAAGATCACTTTCAGGCCTCTGGAATCATCATTTGCGTTTGTAAATGCCATAGAACTCTTGCTTCTACCCGATAATCTGATTCTAGATAATGCTCCGAGTGTGAGACCCAGTGGCAATTCTGCGGATTACACGGGTTTGCAGTCACGGGTGTTACAGATGACTTACAGGCTTAATGTTGGAGGCCCTAATGTCTCAAGAAGCCAAGATGATCTTTTCAGATTCTGGGAAATTGATGATCCGTATTTGATTAACCCTCGGGCTGCTGATACTTCCACTTCCACTGTTGATATTAAATACCGGGACGAAAATTCTGAATCTGATATTCACTGGGCTACTAAGTATACTGCCCCTAATAGTGTTTACCTGAGTGACAAAAAGGTTCTTTTGAATTCCAATGACTCTGATTTCTTTAACATAACCTGGGGTCTTGCTGTAGAAAAGAAAGCTAATTTTCTTGTTCGGGTTCACTGCTGTGACTTGGAGAGTTCTTCTCCTGGTCTTACGCACTTCAATCTGTTCATCTACAGTAACTCCCGCTCAATGATCAGTTCCGTCAACATATCTAACCAGTTGCCTGTTCCATTTTATTATGATTTTGTGGTCAATCCTGATAACTCTGGATTCGTTAATATCAGCATAGCACCTCTTACTTCTCCAGTTCCAAATACGTATCTGAACGGACTGGAAATTATGAGGATTATTGATTCTTCAAATTCCGTTCCGGTGGAGAAATCCAATGCGAATAATAATCATCTCCCTCTCGTGCTGGGGTCATCGCTTGGAATTGGAGGTTTTGTCCTAATATCTATTATACTGGTTGGGTTCCTAATTTGGCGAGCGAAGCTCAGGAAGCAAGAACCTAAGCCTGTAGAGAATTCAGACTGGTTGCCGTTGCCGTTTTATGGAGGAGGAAGTTCTCACAGCGGATGGACTGAAGGAACTCCCCATGGCTCTCCTCTTCCAAACTTAAATCTTGGGCTCAAAATCCCTTTGATTGAGGTCCTATCTGCAACCAACAAATTTGATAACAAAAGATTAATTGGAAAGGGTGGTTTTGGCAACGTTTACAGGGGAGTTCTCAGGAATGGTTTGAGAGTGGCTGTGAAAAGAAGTGAGCCTGGGTCAGGACAAGGCTTTTCAGAATTCCAGACAGAGGTTATGGTTCTGTCCAAAATTCGACACAGGCACCTTGTTTCCTTGATTGGGTATTGTGATGAAAGGTATGAAATGATTTTGGTTTATGAATATATGGAGAAAGGGACACTGAGGGATCATTTGTACAATTCAGATCTGCCAAGCTTGCCTTGGAAGCAGAGGCTTGAGATTTGCATTGGATCTGCAAGGGGTCTTCATTACCTTCACAAAGGAGCATCAGGAGGCATCATTCACCGGGACGTGAAGTCTACAAATATATTGCTCGATGAAAACCATGTTGCTAAAGTTGCTGACTTTGGCCTCTCAAGATCAGGCCCTCTTGAACATCAGCCTTATGTCAGCACAGGGGTTAAAGGCACTTTTGGGTATCTAGATCCTGAGTATTTTCGGTCACAACAGTTAACAGAAAAATCTGACGTTTACTCATTTGGCGTGGTACTTCTTGAAGTGTTATGTGCAAGACCAGCCATTGACCCTATGCTGCCACGGGAGCAGGTGAACTTGGCTGAATGGGGAATCCTTTGCAAGAACAAAGGAATGCTCCAAGGGATTATAGATCCTTCCATCAAGGGGCAAATAGATCCGAACTCGCTCAGGAAATTTAGCGAGGCAGTAGAGAAATGTTTACAGGAAGATGGTTCTGATAGGCCTAGCATGGGTGATGTATTGTGGGACTTGGAGTATGCACTACAGCTTCTCAATTCAGAGAGAACCCCACGATGA	2385	0.4352	MNSTPTVLSSKSTRQTKFFSTYKLPSPTLGLTRNAPLHTLDHKFYIQVHREITNTESGRVFSGYSSLSLSFPKQSSVEAASSLSSDISPIYQKARVFQQKFSYDFPIDTSGSYLVRLHFFAFSSSSNLSTARFNVSVRGFWLLQNFSAKNASNSPLVKEFFISIDATGFKITFRPLESSFAFVNAIELLLLPDNLILDNAPSVRPSGNSADYTGLQSRVLQMTYRLNVGGPNVSRSQDDLFRFWEIDDPYLINPRAADTSTSTVDIKYRDENSESDIHWATKYTAPNSVYLSDKKVLLNSNDSDFFNITWGLAVEKKANFLVRVHCCDLESSSPGLTHFNLFIYSNSRSMISSVNISNQLPVPFYYDFVVNPDNSGFVNISIAPLTSPVPNTYLNGLEIMRIIDSSNSVPVEKSNANNNHLPLVLGSSLGIGGFVLISIILVGFLIWRAKLRKQEPKPVENSDWLPLPFYGGGSSHSGWTEGTPHGSPLPNLNLGLKIPLIEVLSATNKFDNKRLIGKGGFGNVYRGVLRNGLRVAVKRSEPGSGQGFSEFQTEVMVLSKIRHRHLVSLIGYCDERYEMILVYEYMEKGTLRDHLYNSDLPSLPWKQRLEICIGSARGLHYLHKGASGGIIHRDVKSTNILLDENHVAKVADFGLSRSGPLEHQPYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARPAIDPMLPREQVNLAEWGILCKNKGMLQGIIDPSIKGQIDPNSLRKFSEAVEKCLQEDGSDRPSMGDVLWDLEYALQLLNSERTPR	794

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele50g0335	794	PANTHER	OS07G0166700 PROTEIN	497	786	IPR045272	GO:0004714\|GO:0006468
	Lele50g0335	794	FunFam	receptor-like protein kinase FERONIA	481	585	-	-
	Lele50g0335	794	FunFam	Receptor-like protein kinase FERONIA	586	794	-	-
	Lele50g0335	794	Pfam	Protein tyrosine and serine/threonine kinase	513	777	IPR001245	GO:0004672\|GO:0006468
	Lele50g0335	794	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	630	642	IPR008271	GO:0004672\|GO:0006468
	Lele50g0335	794	CDD	STKc_IRAK	516	781	-	-
	Lele50g0335	794	Gene3D	-	48	190	-	-
	Lele50g0335	794	Gene3D	-	219	402	-	-
	Lele50g0335	794	ProSitePatterns	Protein kinases ATP-binding region signature.	516	538	IPR017441	GO:0005524
	Lele50g0335	794	ProSiteProfiles	Protein kinase domain profile.	510	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele50g0335	794	Pfam	Malectin-like domain	72	401	IPR024788	-
	Lele50g0335	794	Gene3D	Phosphorylase Kinase; domain 1	490	585	-	-
	Lele50g0335	794	Gene3D	Transferase(Phosphotransferase) domain 1	586	792	-	-
	Lele50g0335	794	SMART	serkin_6	510	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele50g0335	794	SUPERFAMILY	Protein kinase-like (PK-like)	492	782	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele50g0335	Lele-ChrLele50	1935123	1937821	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele50g0335	53	786	Receptor kinase-like Gene Family	AT4G39110	45.323	0.0	596

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Lele50g0335		Malectin_like	9.2e-29	CL0202