Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0331 ATGGGAAACTCGTCGAAGGACGACTCCACGACCGACGGCGACACCTCCGGCGGCCATACTCCGCCTTCTAGTTCTAGCCTGTACTCCGAGGGCGAGAAAGTACTTGCCTATCATGGCCCTCGCATCTACGAAGCAAAGGCTTTAACTTCTCCCTTCAGTAGAGCACATCTGTCTAAAAAATTAAATCATTCTTTTGAAAGTGCTGTTCCCTATATGGGGATGGAACAAAAAGTGAGCTCCTTAACTTATCTTGATTTCATTTCAAGTTCAGTTTTCAAATTATGGAGTTGGGACGAATGGGTGGGTGAGGACCGTTTAATGAAACATACTGAAGAGAATGTCCTGAAACAGCAGGCTCTTGACAAAAAGCAAGGTGTGGACAAGAATGTCAAGCTAGGGCGTTCAACTCAAGCAAAGGCCAAAAATTCTACAGATGCTAAAGAGGACATCAAGACTAATGTGCCTAAAGCGAAGAAGCGAAAGAATGATTCAGCAGTTGAGGTCTGCGTCTCTGTTGAAAAGCTAGTCAAGATTCAAATTCCGGTAACCTTAAAAAAACAACTTGTTGATGATTGGGACTTTGTTGCTCAGCAAGACAAGAATGTTAAGAAAGCTTCGTTGACCTCCTTTCAAGTAATCCTTGCCCTAACGGCTGGGCTGAGAGCTTATGAACTCCTGGCTTGTCTGCTCGTAAAACTTCCTCGTTCACCAACTGTTGATGAAATTTTGACAAAGTATCTTGAATACAGATCAAAGAAGGATGGCATGGTGGCCGATTCAATTGAGGAAATTCTGAAAGGAATTAGGTGTTATTTTGATAAAGCGTTGCCTATGATGCTCTTATACAAGAAAGAACAGAAGCAGTATAATGAAGCCATTGTTGATGATGTTTCACCATCAACTCTATACGGAGCTGAACATTTATTGCGTCTATTTGTTAAGTTACCTGAGCTTTTGGCATATGTGAATATTGAGGAGGAAACACTGAATCACCTGCAGCAGAAGTTACTCGACTTTCTCAAATTTTTGCAGAAAAATCAAAGTACTTTCTTTCTTTCAGCATATGATGGCGCAAAGAATTTTCGAAGTATTTTGGCAAATGCTATCACGACTGAAATTCATTTGATAGTTCAGCTATTGCCTAATACGCTGAATTCGAAATTTACTGTCGTCGACCCAATTTCAGTCACTTGTATTGTATTCTACCAAGGAGCCAAGAGTATTGGATTCTCCAAATCCTTTCTCCACCAACCCTTCCTCTCTTCCTATTCGACTTTTGGCAGCCGTTTTGCTTCTCGCAAACTTCTCAGGCTTCACCGTCTCCCTCTGTCCTGTGTTGCTGAATCCAGCTCTGATCACCACCACCACCGCGCTCGAACCCAGCACGATCATCACGGTCACCTCCACCACCACAGCGATCAAGCTCACCATGACCATCACGGCTGCCACAACCACCATCACTTACACGGCAACTATTCTGCGAATCTTACCGGATCTCAAAAAGCTATTCTCTTGTTGGCCAAAGCTACCAGATGGATAGACTTGGCAGATGTCTTGAGGGAGCATTTGCATTTATGCTGCTGTTCAACGGCTTTATTTGTGGCTGCTGGCATTTTCCCCCACACCTTGCCTAAGCCCGTCGTCATTGGGCAACTCATATTTAAGCGGCCATTTATTAGTACACCAGTTAATTATGAATGTGCTTTGTTGCTTTCGCACTTGCAGAGGTTCAATTTAGCCCTGGGCCTCATGGTGGCTGCGTCTCCATATGCCTTGGCTGTAGCTCCATTAGCATACGCTACAGCAATCAGCTCCTGTGCAAAAAAGGGGATATTGCTGAAAGGTGGACATGTTCTGGATGCTCTATCCTCTTGCTGTACAATCGCATTTGACAAAACAGGGACGCTGACAACTGGTGGACTTGTATTCAAGGCAATTGAACCAATTTACGGTCATAAGGTTACAAATAACATAACAAAAATTTCTTCCTGCTGTATTCCTAGCTGTGAACAAGAAGCTCTTGCTGTTGCTGCTGCCATGGAAAAGGGTACCGCTCACCCCATTGGAAGAAACTGGGGGAGCCAAACTTTTAAAAGCATCATTGGATCTGTGGATTTTTTCACCTCGTTATGTAAATCTGAAGACGAGTCTAAAAGGATCAAAGAAGCAGTTAATGCATCTTCTTACGGAAGTGAATTTGTTCATGCTGCCCTTTCAGTTGACAAAAAGGAATTGCGAGACGAAGCAGACTTTCGCGTGATGATGTTAACTGGTGACCACGAGTCCAGTGCAAGGAGAGTTGCAACTGCTGTGGGCATCAATGAGGTTTATTGCAACCTTAAACCTGAAGATAAGTTGAATCATGTGAAGGACATCTCAAGGGATATGGGTAGGGGACGTTTAGATGCATTGCTTCCGATTCTCGAGCGCCTTGGACACCGCAAATTTGTGACCAAGCGTTTTCAGTTTTTCACTGAGTCACAGACGTTAAACTTCAGTGAAACTTTAAATTTCAGACTTGTTACCCATAGAATATTAATCCATTCCTCTGCTCCTGGAAATGAAGTTCCTTTCCCATTTTCTGTTCCTAACCCCTTACCCACCTCTCTCGCTCGACCGCGCGTTGTCCTCTATTTACAAAATTATTGCCTAAAACCATCATAA 2664 0.4351 MGNSSKDDSTTDGDTSGGHTPPSSSSLYSEGEKVLAYHGPRIYEAKALTSPFSRAHLSKKLNHSFESAVPYMGMEQKVSSLTYLDFISSSVFKLWSWDEWVGEDRLMKHTEENVLKQQALDKKQGVDKNVKLGRSTQAKAKNSTDAKEDIKTNVPKAKKRKNDSAVEVCVSVEKLVKIQIPVTLKKQLVDDWDFVAQQDKNVKKASLTSFQVILALTAGLRAYELLACLLVKLPRSPTVDEILTKYLEYRSKKDGMVADSIEEILKGIRCYFDKALPMMLLYKKEQKQYNEAIVDDVSPSTLYGAEHLLRLFVKLPELLAYVNIEEETLNHLQQKLLDFLKFLQKNQSTFFLSAYDGAKNFRSILANAITTEIHLIVQLLPNTLNSKFTVVDPISVTCIVFYQGAKSIGFSKSFLHQPFLSSYSTFGSRFASRKLLRLHRLPLSCVAESSSDHHHHRARTQHDHHGHLHHHSDQAHHDHHGCHNHHHLHGNYSANLTGSQKAILLLAKATRWIDLADVLREHLHLCCCSTALFVAAGIFPHTLPKPVVIGQLIFKRPFISTPVNYECALLLSHLQRFNLALGLMVAASPYALAVAPLAYATAISSCAKKGILLKGGHVLDALSSCCTIAFDKTGTLTTGGLVFKAIEPIYGHKVTNNITKISSCCIPSCEQEALAVAAAMEKGTAHPIGRNWGSQTFKSIIGSVDFFTSLCKSEDESKRIKEAVNASSYGSEFVHAALSVDKKELRDEADFRVMMLTGDHESSARRVATAVGINEVYCNLKPEDKLNHVKDISRDMGRGRLDALLPILERLGHRKFVTKRFQFFTESQTLNFSETLNFRLVTHRILIHSSAPGNEVPFPFSVPNPLPTSLARPRVVLYLQNYCLKPS 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0331 887 Gene3D - 13 136 - -
Lele50g0331 887 Gene3D - 640 691 IPR023299 GO:0000166
Lele50g0331 887 MobiDBLite consensus disorder prediction 1 30 - -
Lele50g0331 887 SUPERFAMILY Chromo domain-like 96 195 IPR016197 -
Lele50g0331 887 Pfam haloacid dehalogenase-like hydrolase 627 790 - -
Lele50g0331 887 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 441 548 - -
Lele50g0331 887 MobiDBLite consensus disorder prediction 452 484 - -
Lele50g0331 887 ProSiteProfiles MRG domain profile. 172 367 IPR026541 -
Lele50g0331 887 Gene3D - 623 639 IPR023214 -
Lele50g0331 887 Gene3D - 742 804 IPR023214 -
Lele50g0331 887 FunFam Chromatin modification-related protein EAF3 224 363 - -
Lele50g0331 887 SUPERFAMILY HAD-like 618 797 IPR036412 -
Lele50g0331 887 MobiDBLite consensus disorder prediction 457 484 - -
Lele50g0331 887 Pfam MRG 230 355 IPR026541 -
Lele50g0331 887 ProSitePatterns E1-E2 ATPases phosphorylation site. 631 637 IPR018303 -
Lele50g0331 887 Gene3D MRG domain 173 367 IPR038217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0331 Lele-ChrLele50 1911195 1924224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0331 549 799 Primary Pumps ATPases AT4G37270 57.655 5.45e-85 288