Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0330 ATGAATACAGTCGCCGCCAGAAGGGATATGGACCGGATTAAGGGTCCCTGGAGCCCCGAAGAGGATGAGGCCTTACATAAGCTCGTCGAGAAGCATGGCCCCAGGAATTGGTCCCTGATTAGCAAGTCCATTCCCGGCCGATCCGGTAAGTCTTGCAGGCTTCGCTGGTGCAATCAGCTCTCCCCTCAGGTCGAGCACCGAGCTTTCACGCCCGAAGAGGATGACACCATAATCAGGGCTCATGCCCGTTTCGGTAATAAATGGGCCACCATCGCTCGCCTGCTCTCCGGCCGAACCGATAACGCCATCAAGAACCACTGGAACTCTACCTTGAAGCGCAAGTGTGCATCCATGATGATCGATGACGCCGGCGCTGTCGGTGGATTCGATGGCAGTTTCAGCCCGCAGCCGCTTAAGAGGTCGGTCAGTGCCGGCGACGCTGTACCCGTGTCCACTGGGCTATGCATGAACCCGCCAACGCCGGGTAGCCCGTCCGGATCGGATATGAGCGAGTCCAGTGGCCCCGTTGCGTCTTCTTCTCAAGTCTATCGCCCTGTCCCCAGAACCGGCGGGGTTCTTCCTCCCGTAGAAACGACGTCATCTTCCAATGATCCCCCCACGTCATTATCCCTGTCTCTTCCGGGCGTAGACTCCTCTGAAGTCTCTAATCGGCCTGCAGACCCAAAACATACTGCGCCACCTTCCAATAGTACGCGCTTGTTATCCGTAATGGCTCCGACGCCCGCTCCGGCTCTCCCGCTCGCCCCAACTCCGGCTCTGGCATCTTCTTCGATGTCGGTGCCGCAACAGGTTCATTTGGGTAGGGATGATCGAAGTGGCGAGAGGGGTCCGGATCAGAATGGGTTGCTAGGATTCAATTTCAGTGCAGAGTTGCTAGCAGTGATGCAAGACATGATAAGGAAGGAGGTGAGGAGTTATATGGCGGGGTTGGAGCAGCAGAATGGGGTCTGTTTTCAGGCAGCTGATGGATTTCGAAACGCTTCAGTGAAGCGTATTGGAATTAGCAGGATCGATTCATGA 1041 0.5629 MNTVAARRDMDRIKGPWSPEEDEALHKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASMMIDDAGAVGGFDGSFSPQPLKRSVSAGDAVPVSTGLCMNPPTPGSPSGSDMSESSGPVASSSQVYRPVPRTGGVLPPVETTSSSNDPPTSLSLSLPGVDSSEVSNRPADPKHTAPPSNSTRLLSVMAPTPAPALPLAPTPALASSSMSVPQQVHLGRDDRSGERGPDQNGLLGFNFSAELLAVMQDMIRKEVRSYMAGLEQQNGVCFQAADGFRNASVKRIGISRIDS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0330 346 Gene3D - 67 123 - -
Lele50g0330 346 MobiDBLite consensus disorder prediction 229 243 - -
Lele50g0330 346 FunFam MYB transcription factor 14 65 - -
Lele50g0330 346 MobiDBLite consensus disorder prediction 139 287 - -
Lele50g0330 346 CDD SANT 68 111 IPR001005 -
Lele50g0330 346 ProSiteProfiles Myb-like domain profile. 9 60 IPR001005 -
Lele50g0330 346 SMART sant 65 113 IPR001005 -
Lele50g0330 346 SMART sant 13 62 IPR001005 -
Lele50g0330 346 FunFam Transcription factor MYB44 68 114 - -
Lele50g0330 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 64 IPR017930 -
Lele50g0330 346 MobiDBLite consensus disorder prediction 194 219 - -
Lele50g0330 346 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Lele50g0330 346 Pfam Myb-like DNA-binding domain 68 110 IPR001005 -
Lele50g0330 346 Pfam Myb-like DNA-binding domain 14 60 IPR001005 -
Lele50g0330 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 115 IPR017930 -
Lele50g0330 346 MobiDBLite consensus disorder prediction 156 185 - -
Lele50g0330 346 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Lele50g0330 346 Gene3D - 13 65 - -
Lele50g0330 346 PANTHER MYB PROTEIN-RELATED 14 217 - -
Lele50g0330 346 CDD SANT 16 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0330 Lele-ChrLele50 1910077 1911117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0330 6 345 MYB Transcription Factor Family AT4G37260 49.025 1.61e-99 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele50g0330 Myb_DNA-binding 2.6e-17 CL0123