Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0326 ATGGGAACGTTGTTTTGGGCAGCATCAGCCAACAGTAGCAAACTGTTCTGCAAAATCAAGCTGATGCGAATATACATGGCCATATCTTCTCGTGGTCTTGGAATTCAATGTAGAGTTGGTCTCCGTTCACGGTGGATTATTCTTTCGGTGTTTCTTCTTCTTGTTGATAAGTCCTCAGGCCTGAACAGAGACGGTGTTTTGTTGCTGTCGTTTAAGTACTCGGTTGTGATTGATCCTCTTGGCGTGCTTGGAAGCTGGAATTACAGCAACGACACACCTTGTTCATGGAATGGAGTTACGTGTGCTCAAGCTCGAGTGATTGGCTTATCTCTTCCGAATTCTCAGCTTGTTGGTTCGATTCCTTATGATCTTGGGTTGATTGAGCACCTCAGAATTCTCGACCTTTCGGGCAATTCGCTTAATGGGTCTCTTCCATCTTCACTTTTTCAAGCTTTTGAACTCCAGTCACTTAATTTGTCTGCTAATTTGATAGGCGGCGAGGTTCCAGACTCCATAGTACAGCTAAGAAATCTTCGGGTTCTTAACCTTTCTGACAATGCCTTGGCTGGAAAATTACCTGCCAATCTGGCAAATATGCAGAATCTAACGGTGGCTTCTTTGAATAATAATTACTTGTCGGGCGGTCTTCCTGGTGGATTTCAAACGTTACAGGATTTAGATCTATCTTCGAATTTGTTCAATGGATCTCTGCCTCCGGATTTTGGCGGGGCTAGTTTGCGTTACTTGAACATCTCCTACAACAACATTTCCGGGAAAATCCCTCCAGAATATGCCGAGAAAATTCCAGGTCACGCCACCGTCGACCTTTCCTTCAACAATCTCACCGGCCAAATTCCTGACTCCGTTGTTTTAATCAATCAACTATCCAAGTCATTTTCCGGGAATCCTGATCTTTGCGGTGAACCAACCGAGAATCCATGTCCTATTCCTTCGTCATCTTCTCCACCAAATATTGCCGTTGCTACATCCCCTGCTCTGGCTGCATTTCCAAACACGTTTGACTCTCCTCCTGATTTCGGAGCTTCACCATCTGTATCTCCACAATCTGAGCAAAACGGGATTCGACGAACAACAATTATAGGAATCGTAGTTGGAGATATTGTTGGCATTGCAATCATAGCTTTAATTTTTGTGTATGTCTACAGGTTGAAGAGAAAGGAAAACATGGAAAGCGCTTTGAAGAAGGAAGCTACTGCAGTGAGAAGTGATTGGTCACCACCATCATCATCCGAGCCAAGAGGGTTCAGAAGGTGGTCGTGCTGGCGCAAGAATGCCGAAGATGAAGAGTCCACCGATGACACCACGAGCTCTTCCGGCAGCGAAGCTGGAGCAATAAGTGGGCAAAACCAAAAGATTCATGACAATAGGAGGCAACATGAACAAGAAGCAGGGCAGCGGAAAACAGGGACACTGATAACTGTGGACGGTGAAAAAGAGCTTGAGCTCGAAACACTGCTAAAGGCTTCAGCATTTATATTGGGGGCAACAGGTTCCAGCATAATGTACAAAGCCGTGCTGGAAGACGGATCGGCGTTAGCGGTTCGAAGAATCGACGAGAACGGGCTCGAACGGTTCAAGAACTTGGAGACACAAGCTCGGGTCTTAGCCAAATTGGTGCACCCCAATCTGGTTCGTGTTCGTGGCTTCTACTGGGGAAACGAAGAAAAGCTCATCATCTACGACCTCGTCCCAAACGGCAGCCTAGCAAATTTTCGTTACAGGAAGGTGGGCTCTCCCCCTTGTCACCTACCATGGGAGGTCAGACTCAAGATTGCGAAAGGGGTGGCACGTGGCCTGGCTTATCTCCACGACAAGAAGCACGTGCATGGAAATCTCAAGCCCAGCAATATTCTGTTGGGCAACAACATGGAGCCCAAGATTGGAGACTTTGGGCTCGAGAGAATTGTCCCGGGAGATTCTAGTTATAAAGCGGGCGCGTCCGCTCGGATATTTGGGAGCAAGAGATCCATGGCCTCTCGGAATAGCTTTCCGGACATTGTAGTTGGGCCTAGCCCGAGCCCCAGCCCGAGTGCGATAGGTGGTGTATCTCCTTACCATGCACCTGAGTCGCTCAGGAGCCTGAAGCCTAATCCCAAGTGGGATGTATACTCCTTCGGCGTCATTTTCTTGGAGCTACTGACCGGGAAGATTGTGGTATTGGATGATATGGGTGAGCCGCTTGGGCTTTTGGTTGAGGACAAGACACGGGCTCTTCGGATGGCTGACATGGCGATTCGCGCTGACATGGAGGGAAAAGTGGACTCCTTGTTGGCTTGGTTCCAGTTAGGGTATAGCTGTGTGTCTAGCGTACCCCAGAAGAGGCCGTCAATGAAAGAAGTGTCACAAGGGCGTGTTGTTGAAACTGCGAATGATCTAATAATGACACATGAGAAGTTGCTTTGATCTGAGATTATCGCCTGGATCAACTCCTCACTCCAATTAAGTCTCTCCAAAGTCGAAGAGGCTTGTTCTGGTGCGGTACACTGCCAGCTTATGGATGCGGTCCATCCTGGGATTGTGCCTATGCACAAGGTCAATTTTGATGCTAAGAACGAGTACGAGATGATTCAGAACTACAAGGTCCTTCAAGACGTCTTCAATAAACTCAAAATCACCAAGCACATCGAGGTCAGCAAGCTTGTGAAAGGAAGACCACTGGATAATTTGGAGTTCATGCAGTGGATGAAACGATATTGTGACTCTGTCAAATCGGGACTTCTGAACTCGTAA 2751 0.4751 MGTLFWAASANSSKLFCKIKLMRIYMAISSRGLGIQCRVGLRSRWIILSVFLLLVDKSSGLNRDGVLLLSFKYSVVIDPLGVLGSWNYSNDTPCSWNGVTCAQARVIGLSLPNSQLVGSIPYDLGLIEHLRILDLSGNSLNGSLPSSLFQAFELQSLNLSANLIGGEVPDSIVQLRNLRVLNLSDNALAGKLPANLANMQNLTVASLNNNYLSGGLPGGFQTLQDLDLSSNLFNGSLPPDFGGASLRYLNISYNNISGKIPPEYAEKIPGHATVDLSFNNLTGQIPDSVVLINQLSKSFSGNPDLCGEPTENPCPIPSSSSPPNIAVATSPALAAFPNTFDSPPDFGASPSVSPQSEQNGIRRTTIIGIVVGDIVGIAIIALIFVYVYRLKRKENMESALKKEATAVRSDWSPPSSSEPRGFRRWSCWRKNAEDEESTDDTTSSSGSEAGAISGQNQKIHDNRRQHEQEAGQRKTGTLITVDGEKELELETLLKASAFILGATGSSIMYKAVLEDGSALAVRRIDENGLERFKNLETQARVLAKLVHPNLVRVRGFYWGNEEKLIIYDLVPNGSLANFRYRKVGSPPCHLPWEVRLKIAKGVARGLAYLHDKKHVHGNLKPSNILLGNNMEPKIGDFGLERIVPGDSSYKAGASARIFGSKRSMASRNSFPDIVVGPSPSPSPSAIGGVSPYHAPESLRSLKPNPKWDVYSFGVIFLELLTGKIVVLDDMGEPLGLLVEDKTRALRMADMAIRADMEGKVDSLLAWFQLGYSCVSSVPQKRPSMKEVSQGRVVETANDLIMTHEKLLXSEIIAWINSSLQLSLSKVEEACSGAVHCQLMDAVHPGIVPMHKVNFDAKNEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSVKSGLLNS 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0326 916 MobiDBLite consensus disorder prediction 335 357 - -
Lele50g0326 916 FunFam RP/EB family microtubule-associated protein 800 915 - -
Lele50g0326 916 Gene3D Phosphorylase Kinase; domain 1 456 569 - -
Lele50g0326 916 PRINTS Leucine-rich repeat signature 175 188 - -
Lele50g0326 916 PRINTS Leucine-rich repeat signature 130 143 - -
Lele50g0326 916 Gene3D Ribonuclease Inhibitor 221 316 IPR032675 -
Lele50g0326 916 FunFam Leucine-rich repeat receptor-like protein kinase 61 218 - -
Lele50g0326 916 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 174 789 - -
Lele50g0326 916 MobiDBLite consensus disorder prediction 442 458 - -
Lele50g0326 916 Pfam Leucine rich repeat N-terminal domain 62 101 IPR013210 -
Lele50g0326 916 SUPERFAMILY Protein kinase-like (PK-like) 499 788 IPR011009 -
Lele50g0326 916 ProSiteProfiles Leucine-rich repeat profile. 245 267 IPR001611 GO:0005515
Lele50g0326 916 SUPERFAMILY Calponin-homology domain, CH-domain 798 909 IPR036872 -
Lele50g0326 916 Gene3D Ribonuclease Inhibitor 61 220 IPR032675 -
Lele50g0326 916 MobiDBLite consensus disorder prediction 433 477 - -
Lele50g0326 916 MobiDBLite consensus disorder prediction 302 322 - -
Lele50g0326 916 SMART LRR_typ_2 127 151 IPR003591 -
Lele50g0326 916 SMART LRR_typ_2 220 243 IPR003591 -
Lele50g0326 916 SMART LRR_typ_2 175 199 IPR003591 -
Lele50g0326 916 Pfam Leucine Rich repeat 245 259 IPR001611 GO:0005515
Lele50g0326 916 CDD STKc_IRAK 500 789 - -
Lele50g0326 916 Pfam Protein kinase domain 500 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0326 916 Gene3D - 804 912 IPR036872 -
Lele50g0326 916 Gene3D Transferase(Phosphotransferase) domain 1 570 803 - -
Lele50g0326 916 Pfam Leucine rich repeat 129 188 IPR001611 GO:0005515
Lele50g0326 916 Pfam Calponin homology (CH) domain 809 900 IPR001715 GO:0005515
Lele50g0326 916 ProSiteProfiles Calponin homology (CH) domain profile. 805 907 IPR001715 GO:0005515
Lele50g0326 916 FunFam Leucine-rich repeat receptor-like protein kinase 222 316 - -
Lele50g0326 916 ProSiteProfiles Protein kinase domain profile. 494 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0326 916 SUPERFAMILY L domain-like 64 309 - -
Lele50g0326 916 FunFam Os07g0541700 protein 570 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0326 Lele-ChrLele50 1890637 1895850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0326 47 786 Receptor kinase-like Gene Family AT4G37250 58.607 0.0 806
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele50g0326 Pkinase 8.3e-29 CL0016