Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0325 ATGCCCTTCTATGCATTATACGTTAGTTACAATCCTCTGGAAAGGAGAGAGTCCTGTAAGGGAGGAAGAGAAGCAAACAAGAAATCCTCTCAATCCCAGTCCTCTGCAAAGGTTTCCACTGCCGCGAAGTCTCACTCTTCTCATAATGCACGAAGAAATGATTTATCTTCTGGAAACAATGCAAATCAAGCAGCGAGAGCCACAAAACCTCCAAGCAGCGGCCCTTCATACGATGAACAGATCACGGAGTTAAAACTGTCCATTGATGGCCTTGAAAAAGAGAGGGATTTCTACTTTTCAAAACTGAGGGATATTGAGATACTCTGCCAAAGTCCTGGACTAGAACACTTACCGGTTGTCGCAGCAATTCAGAAGATATTATATGCCACAGGTGATGACGCAACGGTTGTAGCGGAAGCTCAAGCCATGGTTTCGGTTCAGCAGAAGGAAGATGAGAGACTGAGCCCCATCACAGAGGTTTCGGAGGGGAAAGGCAGTACCGAAAATCAGAAGAGAAAGATGATTGTGAATCCAGACTTTGATGCGACTGGCATCATAACATTGTCGCCGAGGCAAAGGCTTTCTGATGTTTCGGATGTTCATTGTAACGGTGTTCAAGATCCCCTTCTTTTCTTGAGAATTTGTGGTGTTGCCTTTGGAAAGAAGGAGGAGAAAAGAGTAGAAGCAGTGGAATACCGATCATCAGCAGGGCAAGGGCAACAAGAAGTGCGGAAGGTGGAGGTGATTCACCAGCCTCATCCCAATCCCAAATCTAATACAAGTGGTGGTGTTCTTTCTAATGCTGCTGCTTCTGTCGCCTCCACCTTAAAATCCGCCAAAGATGCCTTATCTCAAAACTAA 861 0.4553 MPFYALYVSYNPLERRESCKGGREANKKSSQSQSSAKVSTAAKSHSSHNARRNDLSSGNNANQAARATKPPSSGPSYDEQITELKLSIDGLEKERDFYFSKLRDIEILCQSPGLEHLPVVAAIQKILYATGDDATVVAEAQAMVSVQQKEDERLSPITEVSEGKGSTENQKRKMIVNPDFDATGIITLSPRQRLSDVSDVHCNGVQDPLLFLRICGVAFGKKEEKRVEAVEYRSSAGQGQQEVRKVEVIHQPHPNPKSNTSGGVLSNAAASVASTLKSAKDALSQN 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0325 286 PANTHER MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 9 148 IPR027328 GO:0008017
Lele50g0325 286 SUPERFAMILY EB1 dimerisation domain-like 77 133 IPR036133 GO:0008017
Lele50g0325 286 MobiDBLite consensus disorder prediction 16 78 - -
Lele50g0325 286 Gene3D - 76 153 - -
Lele50g0325 286 MobiDBLite consensus disorder prediction 25 78 - -
Lele50g0325 286 FunFam Microtubule-associated protein RP/EB family member 1C 76 154 - -
Lele50g0325 286 ProSiteProfiles EB1-C terminal (EB1-C) domain profile. 66 136 IPR004953 GO:0008017
Lele50g0325 286 MobiDBLite consensus disorder prediction 233 266 - -
Lele50g0325 286 Pfam EB1-like C-terminal motif 91 129 IPR004953 GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0325 Lele-ChrLele50 1888388 1890082 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0325 50 1888388 1890082 Lele50g0325 50 1888388 1890082 ECH
Lele50g0325 50 1888388 1890082 Lele51g0321 51 1823010 1827479 hybridization
Lele50g0325 50 1888388 1890082 Lele52g0335 52 1968640 1977946 hybridization