Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0323 ATGCGGTCTTTAGTTGAAAGGTCTGGGGTGGACCTCGCAGGTAGAGCCCTGAAAGATGAGAGAGGAGTCATGTTTAAGACGGAAAGGGATTTTAATTCCGATTTTTGCGCGTGCAGCAAACGGCAACGGAGAGGAGTTGGGAGAGGAGTTGGGAGAGGCAATGATCTGACCAGAGAAACGGAGTCAAGGATACGGTTTCCTCCCTTCCTCTCTGGACTCCGCAGAGAAACTTATGTAGAAGATGATGCAAATGGCTCACTTTACCCATCTTCTCACAGTATAATGAAGAGGCATTCCTTTACTATCTTCTTGACCGCTATGGCTCTCTCCGAAGAAGCCCAAGATTTTCAGGACTCCTCGTTATTCCTCGACGCGCTCCTCTGTGAGGAGGATGGGTTCGACGAAGAATCTGCTGATGGAGAGGAGGTTCATGACTCCGATTCGGCTGTTAGAGACCCCTCATCTTTACCCTTGATTCTGTTGGATAATGACCTGTTCTGGGAAGATGCTGAGCTTGTCTCCCTTATCTCTAAGGAGGGAGAAACTCATTTAAATTCAAATAATCTTGTTGCCGATGAGCCTCTACAGAAAGCGCGCGAGGAGGCTGTGAGATGGATTTCAAGAGTTTGTGCGCACTATGGTTTCTCTACTTTGACCACTGTTCTCTCTGTGAACTACTTCGATAGGTTCGTCACGAGCCTCACGTTTCAGAAGGATAAGCCCTGGATGACTCAGCTCGCTGCGGTTGCCTGCTTAGCTCTGGCTGCGAAAGTGGAAGAGATCCGAGTCCCTCTTCTTTTGGACCTGCAAGTGGAGCAATCGAAGTACGTGTTTGAGGCGAAGACAATACAGAGAATGGAGCTCCTAGTGTTATCAACTCTTAACTGGAGGATGAATCCGGTGACTCCAATCTCCTTCTTTGAACTTATTGTCAGAATGCTGGGTCTAAAGAGTCGCTTGCATTGGGAGTTCTTGTTTCGGTGCGAGCGTGTGCTTCTCTGTCTCATTCTGGATTCAAGGCCTATGAGTTATAGTCCATCCACATTAGCTGTTGCTATAATGATCCACGTTATTAGTGAGGTTGAACCATTAAATGCAATGGAGCACAGAAATCAGCTTATGGTTTTACTCAAAATCAGTGAGGAACAAGTGAATGAATGTTACAAACTTATTCTGAAACTATTAGGCTGTCATGAAGACATTCAAAATATTAACCATAAACGCAAGCGCCTGTCTAGCCAAGATGGGGTCATTGATGTGTGTTTCAGCAGTGATTGCTCAAATGACTCGCGGGCCAAGGCATCATCACTCTCATTGTCACTAGAGCCAATGTTTAAGCGAAGCAGGGCCCTAGAGCAGCAGATGCAATTGCCTTCCATCAATCGTGTGTCTATTAATGTTCTTCACAGCCCTCGTTAA 1419 0.463 MRSLVERSGVDLAGRALKDERGVMFKTERDFNSDFCACSKRQRRGVGRGVGRGNDLTRETESRIRFPPFLSGLRRETYVEDDANGSLYPSSHSIMKRHSFTIFLTAMALSEEAQDFQDSSLFLDALLCEEDGFDEESADGEEVHDSDSAVRDPSSLPLILLDNDLFWEDAELVSLISKEGETHLNSNNLVADEPLQKAREEAVRWISRVCAHYGFSTLTTVLSVNYFDRFVTSLTFQKDKPWMTQLAAVACLALAAKVEEIRVPLLLDLQVEQSKYVFEAKTIQRMELLVLSTLNWRMNPVTPISFFELIVRMLGLKSRLHWEFLFRCERVLLCLILDSRPMSYSPSTLAVAIMIHVISEVEPLNAMEHRNQLMVLLKISEEQVNECYKLILKLLGCHEDIQNINHKRKRLSSQDGVIDVCFSSDCSNDSRAKASSLSLSLEPMFKRSRALEQQMQLPSINRVSINVLHSPR 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0323 472 FunFam D3-type cyclin 192 299 - -
Lele50g0323 472 PANTHER CYCLINS 166 402 IPR039361 -
Lele50g0323 472 Pfam Cyclin, C-terminal domain 301 412 IPR004367 -
Lele50g0323 472 Pfam Cyclin, N-terminal domain 177 299 IPR006671 -
Lele50g0323 472 Gene3D - 176 389 - -
Lele50g0323 472 SUPERFAMILY Cyclin-like 283 402 IPR036915 -
Lele50g0323 472 CDD CYCLIN 199 291 IPR013763 -
Lele50g0323 472 Gene3D - 185 299 - -
Lele50g0323 472 SMART cyclin_7 204 292 IPR013763 -
Lele50g0323 472 SMART Cyclin_C_2 301 429 IPR004367 -
Lele50g0323 472 FunFam CYCLIN D32 300 389 - -
Lele50g0323 472 SUPERFAMILY Cyclin-like 169 299 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0323 Lele-ChrLele50 1876881 1881706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0323 107 462 Core Cell Cycle Gene Families AT5G67260 49.589 5.67e-102 309