Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0317 ATGGCCACCGACTTCAGTTGCATCCCCATCATTGATATTAGCGCCCTTGTAGCCCAGTCCGATGACCCAAATATTGCTGACGACCCTGCAGTCTCTGAGATTCTGATTTTGTTTCGGAATAATGTTCATGTCACTTGTGATGGTCATGGTATTCCTGCTACTCTTCTCAATGAGGTTAAAGAAGTAACACGCAGATTCTTTCAACTTCCATATGAAGAAAAGACGAAGATCAAAATGACCGCGGCTACAGGTTTCAGCGGGCTTAATAAGTTAGTCAACAACTCCTTTTCCTGGAACAGTGCTATAGGGAAGTTACAGAGGGCATGTATGGAACGCTTGGCAAACCCATGGAAGGATGCAACCAGTGAGCTTGCACTAAAAATCATGAGGGGAATTGCTTTAGCATTAGGTGGATCACCAGATGAATTTGAAGGTCACAGAGCTGGGGATCCATTTTGGGTTATGAGACTTATTGGTTATCCAGGTGTATCTACTGCAAATGGAAAAGCTGATCTCAAAAACGACATTGGATGTGGAGCTCACACTGATTATGGTTTATTGACACTGCTTAATCAGGATGACGATATAAATGCACTCCAGGTGAAGAACCTGTCCGGGGAATGGATATCAGCACCTCCGGTTCCTGGATCATTTGTGTGCAACACTGGCGACATGCTAAAGATATATTCCAACGGTTTGTACGAGTCAACTCTGCATCGGGTGATAAACAACTCAGAAAGATACAGAGTCAGCGTAGTGTATTTCTACGAGACAAACTTCGATACGGCAGTGGAGCCATTGGATACCTTTAAAACGAGAGCGAATGGTCCCAACAAGTTTAGAAGAGCCGTATATGGCGAGCATCTAGTTAGCAAGGTCACCACCAACTTCGTTGATATCTAG 903 0.4419 MATDFSCIPIIDISALVAQSDDPNIADDPAVSEILILFRNNVHVTCDGHGIPATLLNEVKEVTRRFFQLPYEEKTKIKMTAATGFSGLNKLVNNSFSWNSAIGKLQRACMERLANPWKDATSELALKIMRGIALALGGSPDEFEGHRAGDPFWVMRLIGYPGVSTANGKADLKNDIGCGAHTDYGLLTLLNQDDDINALQVKNLSGEWISAPPVPGSFVCNTGDMLKIYSNGLYESTLHRVINNSERYRVSVVYFYETNFDTAVEPLDTFKTRANGPNKFRRAVYGEHLVSKVTTNFVDI 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0317 300 SUPERFAMILY Clavaminate synthase-like 3 296 - -
Lele50g0317 300 Pfam 2OG-Fe(II) oxygenase superfamily 174 258 IPR044861 -
Lele50g0317 300 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 45 288 - -
Lele50g0317 300 Gene3D - 1 299 IPR027443 -
Lele50g0317 300 Pfam non-haem dioxygenase in morphine synthesis N-terminal 8 97 IPR026992 -
Lele50g0317 300 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 151 258 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0317 Lele-ChrLele50 1848224 1851957 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0317 49 288 Glycosyltransferase AT5G59530 26.038 4.63e-14 70.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0302 49 1780236 1783428 Lele50g0317 50 1848224 1851957 ECH
Lele50g0317 50 1848224 1851957 Lele50g0317 50 1848224 1851957 ECH
Lele50g0317 50 1848224 1851957 Lele51g0311 51 1780946 1784053 hybridization
Lele50g0317 50 1848224 1851957 Lele52g0327 52 1927426 1929966 hybridization