Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0313 ATGGTGCAACTCGGGGGGCCTCTTTGTGGATTTAGAAATTCAGTGTTGGCGTGTTTTGATGCTTTCGTTGAATGGTGGTTTGCAATGTGCAAATTGAATCCCCTACATGCAGTGGTCGGAGGATGTGGAAAGTGGAATCCGATCTGTGAAGCGGATACTTTTTCCGGGTGCCAATCTGGAGAATATATTATTCCCCCTTTTCCTTTTCGATTCTCTGCCTTCTGGCTTGGGCGTCTACGGCAAATCCCCTTTTACGCATCGATCTCCTCCATTGCCGACAATCACGGGATTGGACTATTTAATGTGTTCTTTTTTGGGTCCAAGGGTTCGAAATCAACGAGAGCGAAGCCTCTTCACTGGACGTCATGCTTAAAGATAGCTGAAGATGTAGCCCATGGAGTCGCCTATATACATCAAGCCTCGAGATTAATACATGGCAACCTGAAGTCGACCAACGTCCTTCTTGGCGTGGACTTTGAAGCTTGTGTCACAGACTATGGCTTGGCCTTCCTTGCGGACTTTTCATCGACTGAAGACCCTGACTCTGCGGCTTATAAAGCACCAGAGGCTCGCAACTCTAGCCGCCGAGCCACTTCCAAGTCCGATGCATATGCCTTTGGGGTGCTTCTACTAGAGCTTCTTACGGGTAAACGTCCTTCTCAACATCCTTTCCTTGTGCCCGCGGATATGCAACATTGGGTTAGAGCTATGAGGGATGACGATGGTGCTGAACATAATGAGCTTGGGATGCTCACCGAAGTCGCTATCATTTGCAGTGCAACGTCGCCTGAGCAGCGGCCGGCGATGTGGCAAGTCTTGAAGATGATACAGGAGATAAAGGACAGTGTAACGATGGAGGATACAGCAACTGCTAGGGTTTCATAA 885 0.4881 MVQLGGPLCGFRNSVLACFDAFVEWWFAMCKLNPLHAVVGGCGKWNPICEADTFSGCQSGEYIIPPFPFRFSAFWLGRLRQIPFYASISSIADNHGIGLFNVFFFGSKGSKSTRAKPLHWTSCLKIAEDVAHGVAYIHQASRLIHGNLKSTNVLLGVDFEACVTDYGLAFLADFSSTEDPDSAAYKAPEARNSSRRATSKSDAYAFGVLLLELLTGKRPSQHPFLVPADMQHWVRAMRDDDGAEHNELGMLTEVAIICSATSPEQRPAMWQVLKMIQEIKDSVTMEDTATARVS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0313 294 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 113 282 - -
Lele50g0313 294 Pfam Protein tyrosine and serine/threonine kinase 115 274 IPR001245 GO:0004672|GO:0006468
Lele50g0313 294 Gene3D Transferase(Phosphotransferase) domain 1 85 293 - -
Lele50g0313 294 ProSiteProfiles Protein kinase domain profile. 1 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0313 294 SUPERFAMILY Protein kinase-like (PK-like) 116 281 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0313 Lele-ChrLele50 1838754 1839861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0313 99 287 Receptor kinase-like Gene Family AT3G50230 59.585 1.19e-69 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele50g0313 PK_Tyr_Ser-Thr 1.1e-18 CL0016