Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0300 ATGGCAAGACAGATCCGAGTCGTCTCAACCAGCAACGTGCAAGCATTGGCTCGAAACTGCGATCCGACTCGAAAGATTGAGTTGACTCCATGGGATCTTCAGATCCTCCTAGTGGACCCCATTCAGAAAGGCCTTCTTTTCCGCAAACCCAGTGCTAACATGGATTCCATAATCCACCACCTGAAAACGTCTCTCTCATCCACCCTCGGTTTCTTCCCACCCCTCGCCGGTCGTCTCACCGTCGAAGAACACGACAACGATACCTCATCCGTTTTCGTTCTCTGCAACAACTCCGGAGCATCATTTGTGCACGCTGTAGCAGATGATTTGACCATCTCAGATATCCTTCAACCCATCTACACTCCTCGCATCGTCCATTCCTTCTTCCCGCTTAACAGAGTAAGAAACTACGAAGGCACGAACAAGCCACTGCTAGGCGTGCAAGTCACTGAGCTAGGAGACGGCTTTTTCATCGGCTGCACTATCAACCACGTCGTTGGGGACGGCACGTCGTTTTGGCATTTCTTCAATTCCTGGGCTGAAGTCTCACGTGGTTCCAGCGAGTTATCCAAGCCTCCCAAGCTCGAGCGTTGGTCTCTCGATGGCATCAATCGTCCTATACGCATTCGTCTCGACAAGACGAAGCAGAAGCAGAAGCAGAAGCAGAAGCAGGAGTTCGATGGGTACCTCGATTCGCAGTTGCAGCAAGAGAGGGTGTTTCACTTCTCAAGTGAAAAAGTGGCAGAACTGAAAGCCAAAGCTAACGCGATGGTATGTTCCAATAAGATATCTTCTCTGCAAGCAACTTTGACCCATCTTTGGCGCGCCATAGTTCGGAACCAAGGTACTGTTGACCCAGAAGAAGAGGTTAACTACAGATTGCTGATAGGTATAAGGCCGAGGGTGCGTCCTCCATTGCCTCAGAACTATTTTGGAAATGCGGTGCAGGATGGTACCGTGAGCATCAAAGCAGGGGAACTGCTAGCTCAAGAGGGTCTCGGTAAGGCTGCTCTGGATATGAACAGGATGGTTGCTTTGCACACCGAAGAGAAGCTGGTGAGCCACGTCAAGTCTTGGATGAAAAACCCTAGGCTGCTTACAGAGGATGGGATGGCTAGGAATGCATTGGTTACCAGTAGTTCGCCGAGGTTTGATGTGTATGGTAATGACTTTGGATGGGGAAAGCCGGTGGCTGTCCGAAGCGGTGCCGGGAACAAGACGTATGGGAAAATTACCGTGTTTGCCGGAGCAGAGAGCGGCAGCATTGATGTGGAAGTTTCCCTTTCTTATGAAATTTTGGAGGCCATGGCAAAGGACTCTGAGTTCATGGATGCTGTCTCAGTTGCTTCTCCTATGATTAATTAA 1365 0.5011 MARQIRVVSTSNVQALARNCDPTRKIELTPWDLQILLVDPIQKGLLFRKPSANMDSIIHHLKTSLSSTLGFFPPLAGRLTVEEHDNDTSSVFVLCNNSGASFVHAVADDLTISDILQPIYTPRIVHSFFPLNRVRNYEGTNKPLLGVQVTELGDGFFIGCTINHVVGDGTSFWHFFNSWAEVSRGSSELSKPPKLERWSLDGINRPIRIRLDKTKQKQKQKQKQEFDGYLDSQLQQERVFHFSSEKVAELKAKANAMVCSNKISSLQATLTHLWRAIVRNQGTVDPEEEVNYRLLIGIRPRVRPPLPQNYFGNAVQDGTVSIKAGELLAQEGLGKAALDMNRMVALHTEEKLVSHVKSWMKNPRLLTEDGMARNALVTSSSPRFDVYGNDFGWGKPVAVRSGAGNKTYGKITVFAGAESGSIDVEVSLSYEILEAMAKDSEFMDAVSVASPMIN 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0300 454 Pfam Transferase family 22 443 - -
Lele50g0300 454 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 17 443 - -
Lele50g0300 454 Gene3D - 2 225 IPR023213 -
Lele50g0300 454 Gene3D - 235 442 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0300 Lele-ChrLele50 1755833 1757197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0300 61 438 Monolignol Biosynthesis Gene Families AT5G48930 26.551 7.48e-25 104