Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0299 ATGGCACAAGGCTCAGTTACTTCAAAGGATGTTTTATCGGTTATTGATTCGTTAAAAGAACATATATCTGCTGAGCGATGTGTTTCCATCAAGAAAAGAATGGAAGACAATAGACAGAAGCTGATTGGCGTCACAAATCATATTTATAAATCATCAACGAGAAGAAGAATCTGTGGCATTACTGATGCTAATGGAAGTCCAGACCTACTGACGAAGAGGCAAAAAGATGCAATCGATATGGGCAACGATATTCATGCAAGTAATGGTGACAAGGAGAGCAAAGGTCCCCAGGAAGAGCGCCATTTTTCTACAGCAGTCCTTCTAGGATCTAACGTTGCTGTAAAGAATGCTGTTCGCCCTATCAAGCTGCCAGAGGCAAAAAGATTACCTCCTTATACTACGTGGATTTTTCTGGATAGAAATCAAAGAATGACTGAGGATCAGTCTGTAGTAGGTCGAAGGAGAATTTATTATGATCAAAATGGTGGAGAAGCACTTATTTGCAGTGACAGCGAGGAGGAAATAATTGAGGAAGAAGAGCAAAAAAGGGATTGTGTGGAATTTGAAGGTTATATACTTTGGTTGTCTCTGGCTCAGTGTTTCTCTAGAAACACTTTTGAACTTAAGGCAAGATATGAAGTTATCAGTAATGAAGAAAACATTGGTGGGGTTTCTAAGAGTGGCGGTACTGAAGCGAATTCACTAAATGGAAATTCTTTTCTGGAAAAAGATCTTGAAGCAGCTCTTGATTCTTTTGACAACCTTTTCTGCCGAAGATGTCTTGTTTTCGGTTGCAGATTGCATGGATGTTATCAGGATCTTGTCTTTCCTGCCGATAAACAACACGTGTGGATCCCTCCAAATGCTGAAAATACACCATGTGGTCCAAATTGTTTTCAATTGGTAATCAAGACACAAAGATTTGCCAGATTAACCTCTTCTGCCCTGGGAGATGTTGAGGAGAAAAGCTCAGGTGGTGCTGGGGTGCATATACCATATGGGAAGAAGTCTTGTGGTCCGTCTGCTAGAAGGCAGGTAAAGGGCGGCCAAAGTGAAAGTGCTTCATCCAAAGCGAAGAACTTATCTGAAAGTAGTGACTCAGAGAATGGTCCTGGACAGGAAACTGTTTCAGCCTCCCACTCAGCATCTCCTAAAACTAGAACTCTGGGGAAAGGTGAAGTAGGTAAAAGGAACAGTAAGCGTGTGGCAGAACGTGTCCTGGTTTGCTTGCTGAAGAGACAGAAGAAAACACTGGGTGAAGCTCCTGATCGTTCATCAGATGAGATGGCTTTTGACCCACTTAATAGTGATGACATCTTGAGGAAGGAAGAATTCTTTGATGAGAATGTATGCACACAACAATCTGCTGACAATAAGGCGTGGAAACCTCTTGAAAAGGGGCTTCTGGAGAAAGGACTTGAAATTTTTGGCAGAAACAGGAATCTCTTAAATGGTCTAAAGTCGTGTTGGGAGGTTTTCCAATACATTAATTGCAATGAGGGAAAGGTGTCAGGATCTTCTGGTGATTCTGAATTTTCCCTCATGGAAGGCTATTCCAAGCTTGTGAAAAGCAGTGTCCTTGTATTCAAAACGGAACCTGCTGTGAGAAATACTGTGGAGTTGCAAGAATCGATTACGTGGCTGTCATTGTGCAAAGAGTCAATGCCGAAGTCGCAATGTCCATGCTTTGCAGCAGATAGGGAATGTGATCCAGATGTTTGTAGAAATTGTTGGGTCAGGTCTGACATATCTGGTTGGGGAGCTTTCTTAAAGGTATTGGCCAACAACGTATTTGATCGTCATATTGCTGCGCAGTTGCATGGGGATGGTGCTTTTGTTTGTTTCTTTTTCCCTGGTAGATTAGTTCTTTCCCCCTTTATGGATGAGTCGTCATGTTGCTACATGCAGTTTGTTCTGGATGCTTATCGAAAGGGATCGTTGATGGTGAGCCTAATATCCAGTGGCTATCAAATTAAACTCTGGCAGGTTATTATGGTTGCTGGAGATCACAGAGTAGGGATTTTTGCCAAGGAAAGGATCAGTGCTGGGGAGGAACTTTTTTATGATTATCGCTATGGGCCAGAGAGAGCTCCAGCTTGGGCTCGGAAGACCGAGGCATCTGGGTCTAGAAAAGATGACGGCGCTCCTTCAAGCGGTCGGGCGAAGAAGCTCGCTTAG 2178 0.4302 MAQGSVTSKDVLSVIDSLKEHISAERCVSIKKRMEDNRQKLIGVTNHIYKSSTRRRICGITDANGSPDLLTKRQKDAIDMGNDIHASNGDKESKGPQEERHFSTAVLLGSNVAVKNAVRPIKLPEAKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIIEEEEQKRDCVEFEGYILWLSLAQCFSRNTFELKARYEVISNEENIGGVSKSGGTEANSLNGNSFLEKDLEAALDSFDNLFCRRCLVFGCRLHGCYQDLVFPADKQHVWIPPNAENTPCGPNCFQLVIKTQRFARLTSSALGDVEEKSSGGAGVHIPYGKKSCGPSARRQVKGGQSESASSKAKNLSESSDSENGPGQETVSASHSASPKTRTLGKGEVGKRNSKRVAERVLVCLLKRQKKTLGEAPDRSSDEMAFDPLNSDDILRKEEFFDENVCTQQSADNKAWKPLEKGLLEKGLEIFGRNRNLLNGLKSCWEVFQYINCNEGKVSGSSGDSEFSLMEGYSKLVKSSVLVFKTEPAVRNTVELQESITWLSLCKESMPKSQCPCFAADRECDPDVCRNCWVRSDISGWGAFLKVLANNVFDRHIAAQLHGDGAFVCFFFPGRLVLSPFMDESSCCYMQFVLDAYRKGSLMVSLISSGYQIKLWQVIMVAGDHRVGIFAKERISAGEELFYDYRYGPERAPAWARKTEASGSRKDDGAPSSGRAKKLA 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0299 725 MobiDBLite consensus disorder prediction 700 725 - -
Lele50g0299 725 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 636 723 IPR045318 GO:0006338|GO:0018024
Lele50g0299 725 SUPERFAMILY SET domain 552 693 IPR046341 -
Lele50g0299 725 MobiDBLite consensus disorder prediction 344 386 - -
Lele50g0299 725 Pfam CXC domain 551 578 IPR041355 -
Lele50g0299 725 Gene3D SET domain 534 693 IPR046341 -
Lele50g0299 725 MobiDBLite consensus disorder prediction 319 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0299 Lele-ChrLele50 1744524 1751336 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0299 50 1744524 1751336 Lele53g0139 53 1110280 1115550 CCT
Lele50g0299 50 1744524 1751336 Lele54g0139 54 1176657 1180197 CCT
Lele50g0299 50 1744524 1751336 Lele55g1350 55 19923447 19926956 CCT
Lele50g0299 50 1744524 1751336 Lele56g1296 56 16222548 16226190 CCT
Lele50g0299 50 1744524 1751336 Lele50g0299 50 1744524 1751336 ECH
Lele50g0299 50 1744524 1751336 Lele52g0308 52 1812195 1819129 hybridization