Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0294 ATGGAGGAATCGGGCTATAATTTCTGGCGTAAGCTGCGCTGTCCTAAGTGCCCAGAAGATGGTGTTGGCAGAATTTCTCCTGCAATGATTGCCAATCAGGTCAAAAGGCAAGCAGGTAAGTTTATTTCAATGTACTACAGAGGCTTGTTAATGTTAACAACGATCGCAGCAATTTTACTTTGCTTCCAGTGTGACGTTGAAACTTGTAAGTATTCAACACGAAGTATCAACCTTCGGCTGGTTGGTGATTCTGAAAGAGGAACTGTTTGTCCAAATTACCCTCACTGCAACGGGTGTCTTCTAAGACAGTCTGTTGCTTCTCTAGTACACGGAGGCAGACTTGTACAAACAGCTCTCGTATTTCTGCCATGTGTGGATACTGTTTCCAGTATAGAAAAGATGGAGGTTAAATCTAGGATACCACTTGAGAAAGAGTTGTCGAAAATTAGGCCAATGGTTGATCTGGCAGCATCAGCAGCTATACAGCGGAATCGGGATCGGCGTGCCTTTGGGTGGGTACAGATGCAGGACTTGGCCATCACTGTATGA 549 0.4481 MEESGYNFWRKLRCPKCPEDGVGRISPAMIANQVKRQAGKFISMYYRGLLMLTTIAAILLCFQCDVETCKYSTRSINLRLVGDSERGTVCPNYPHCNGCLLRQSVASLVHGGRLVQTALVFLPCVDTVSSIEKMEVKSRIPLEKELSKIRPMVDLAASAAIQRNRDRRAFGWVQMQDLAITV 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0294 182 PANTHER DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 11 180 - -
Lele50g0294 182 Pfam DNA Polymerase alpha zinc finger 7 178 IPR015088 GO:0003887|GO:0006260
Lele50g0294 182 Gene3D DNA Polymerase alpha, zinc finger 1 152 IPR038256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0294 Lele-ChrLele50 1716034 1718224 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0294 2 180 Core DNA Replication Machinery Family AT5G67100 49.444 1.49e-49 169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0294 50 1716034 1718224 Lele50g0294 50 1716034 1718224 ECH
Lele50g0294 50 1716034 1718224 Lele51g0294 51 1660733 1671853 hybridization
Lele50g0294 50 1716034 1718224 Lele52g0302 52 1784702 1787710 hybridization