Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0277 ATGCCGACGGAAGACGCTCTGGATTCCTTGGATTTTGTGGAGAGAATGAAGCAAGCTCCTGTAGAAACAAACAGCAAAGGGTCGGCAAAGACCGTTTTGGGCATTGATTGCGCAATAAGGACGTCGCTTTGCCGGAACGTCGGCTTGAAGACGATGGCCATAGACGCAGGCGAAGCTCTATTTCCACCCTTTCAGAATAGCAATTCCAGTCAGTTGCGCCATTTTTATCTTGCAGTAGACAGGCTACAGTTCAAAATGGAAACTTTGAAGGATCTGCTGGGTTTGGTGGGCCGGCGTCCATGCCTACCCATTGTAGTCTGTTGCAGTACGCGTGACGAGCTTGACTCTGTCTGCTCAACCTTTTCCAGCCTTCCCCTTGTATCTTTGTCAGTCTTGTATAGTGACCTTGCTGAAGCAGAACGTGCTCTTATCTTAGAGAAATTTCAGCAAGTGACTACAAGGTGGAGCCTGGTAAACCATGTTGGAACAGAAAATGAAGATGAGGATGGGAAAGATGAGCAAAGGTCTCATATGATAGTTGTAACAGATGCATGCCTTCCTCTCCTTGCCTCTGGGGAATCTCCAATATCTGGTCATCTTCTGATTAATTATGAACTACCAGCAAAGAAGGAAACATATATGAGGCGCATGGCAACTTGTTTGGCAGCTGATGGAGTTGTCATCAATATGGTTGTTGGTGGTGAAGTGGTAACTCTCAAAAGCATTGAAGAAAGCAGCGGTATTTTCATACAAGAGATGCCCATGCAGATTCTTGATATTTTGTGA 786 0.4567 MPTEDALDSLDFVERMKQAPVETNSKGSAKTVLGIDCAIRTSLCRNVGLKTMAIDAGEALFPPFQNSNSSQLRHFYLAVDRLQFKMETLKDLLGLVGRRPCLPIVVCCSTRDELDSVCSTFSSLPLVSLSVLYSDLAEAERALILEKFQQVTTRWSLVNHVGTENEDEDGKDEQRSHMIVVTDACLPLLASGESPISGHLLINYELPAKKETYMRRMATCLAADGVVINMVVGGEVVTLKSIEESSGIFIQEMPMQILDIL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0277 261 Gene3D - 65 261 IPR027417 -
Lele50g0277 261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 257 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0277 Lele-ChrLele50 1630524 1633091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0277 72 261 Eukaryotic Initiation Factors Gene Family AT3G19760 24.479 8.41e-13 65.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0277 50 1630524 1633091 Lele50g0277 50 1630524 1633091 ECH
Lele50g0277 50 1630524 1633091 Lele51g0278 51 1578756 1581843 hybridization
Lele50g0277 50 1630524 1633091 Lele52g0283 52 1687111 1689801 hybridization