Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0274 ATGTGTAAGGCAGGCAGCAATTCTTGTTTGTATTGTGTTGAGATGGTGGTTGCTCATGGAAAGAACCTAGAGTTAGACGATCGGTCGGCTAAGAAGGAGGTGGTGGACCACCCTCGTGCTTCTACGTCTGCCGGGAAAGCCGTTACTCCGCCGCGGCACGGTAAAAATACGGATGACGATGATGACTTAACCCTGGCCAATTGGTCAGAGTCTCCCATACGCGTCCGTCCTTCAACTACGAACAAACGGAACAAGATGGTGCAGAATCAACACAGGCTCATGAACATTCAAAAAAAATATTCGGATTCCATACCTAATCAAGGCTCATCCGATCAGGCACAAAGGCTTGCCAGCTCCTCCAAGGTGGCAACAGACAAGACATTATCAGCAGGAGAGGCCCGGTCGTCTGCTGTGTTTCGAGCAGAGATGATTCAATCAACGTTAGATCCGAGATTCCCTAGCTTTGTCAAGTCATTGGTCAGACCACATGTTGGTGGTTGTTTTTGGATGGGGCTCCCCGCGTTTTTCTGTAAAAGACACTTGCCGGATAATGACGCTACGGTTACTTTGGAAGATGAATCCGGTAAAGAATCCCAGTTGAAATACATTGCTTGCAAAGCAGGTTTGAGTGCTGGTTGGAGGCAGTTTTCTGCAGTCCACAAATTGCAGGAGGGAGATGTTTTGGTCTTCCAATTAGTTGAACCTTCTAAATTTAAGGTATATATAGTAAGATTAAATGGCTTGAGCGAACTGGACGGGGCGGCTTCCCTTCCGAATCTGGACGATTATACCAAGCAAAAAGCTAGAGATAATGCAAATAAGGATGCTCTACTGAGTAATGGCCCAAAGAGGAAGCAAGAAAAATCTGACTCACCATCTCCAGTTGTCCAAAAGAAAAAGAAGACAAGTGTGTCGAGGTTTTCCCCGAAGGTTAGGCAGTGCGAAGAACAATGCGAATATGAAAGTGATGAAGCTGTTTCAGAGGTACTGGAGAGCCTTGTAACGGAGCTTAAATTCAAAGATGTAAAAGGTTTTGAAAATTTCAGTATCATAATTGATGGAATTCCAATAGATTCAGAGCTCCCTGAGGAGATTCGAAGTAAGTATTACATGCTCTGCCATAGCCAGCAGGCCTTTCTACACGAGAATCTCATCAAGGGCATCAACTTTTACCTCGGTGTCGGTATTATATCTGAAGTTGTCAACATTTCTGATGCCTTGAAATCCAGCTCACTGCATATCTCAGCTGCTGAATTTGCTAAATGGGATAAAGAGTTGCTAGCCTTTGAGTATTTGGGCATGAATATGGAGTTTTTAAGACACCGGTTATGCAGGCTTGTAAACTTGGCGTACGAAACACAAGATGCCTCCGAGACTTCAAGGTACTCGGCCACGGCGACGGCGTCCACAACTGAATTCACTCGAGCAGATAACGAAATAATGAATATTGAAACAAAGCTTGAACAATTGAAGGAAGCTTGTGATGGTCTTGGTGCTTATATTGAGAGTTTGAAGTGCAAAGCTGAGAGCTTACATCACTAG 1542 0.4462 MCKAGSNSCLYCVEMVVAHGKNLELDDRSAKKEVVDHPRASTSAGKAVTPPRHGKNTDDDDDLTLANWSESPIRVRPSTTNKRNKMVQNQHRLMNIQKKYSDSIPNQGSSDQAQRLASSSKVATDKTLSAGEARSSAVFRAEMIQSTLDPRFPSFVKSLVRPHVGGCFWMGLPAFFCKRHLPDNDATVTLEDESGKESQLKYIACKAGLSAGWRQFSAVHKLQEGDVLVFQLVEPSKFKVYIVRLNGLSELDGAASLPNLDDYTKQKARDNANKDALLSNGPKRKQEKSDSPSPVVQKKKKTSVSRFSPKVRQCEEQCEYESDEAVSEVLESLVTELKFKDVKGFENFSIIIDGIPIDSELPEEIRSKYYMLCHSQQAFLHENLIKGINFYLGVGIISEVVNISDALKSSSLHISAAEFAKWDKELLAFEYLGMNMEFLRHRLCRLVNLAYETQDASETSRYSATATASTTEFTRADNEIMNIETKLEQLKEACDGLGAYIESLKCKAESLHH 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0274 513 SUPERFAMILY DNA-binding pseudobarrel domain 149 248 IPR015300 -
Lele50g0274 513 MobiDBLite consensus disorder prediction 28 65 - -
Lele50g0274 513 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 73 246 IPR044837 -
Lele50g0274 513 MobiDBLite consensus disorder prediction 280 295 - -
Lele50g0274 513 Pfam B3 DNA binding domain 155 244 IPR003340 GO:0003677
Lele50g0274 513 MobiDBLite consensus disorder prediction 101 128 - -
Lele50g0274 513 Gene3D - 131 246 IPR015300 -
Lele50g0274 513 SMART B3_2 155 246 IPR003340 GO:0003677
Lele50g0274 513 CDD B3_DNA 153 244 IPR003340 GO:0003677
Lele50g0274 513 Coils Coil 473 493 - -
Lele50g0274 513 MobiDBLite consensus disorder prediction 271 304 - -
Lele50g0274 513 ProSiteProfiles B3 DNA-binding domain profile. 155 246 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0274 Lele-ChrLele50 1620268 1623769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0274 125 274 B3 DNA Binding Superfamily AT3G19184 44.371 2.53e-37 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele50g0274 B3 2.5e-15 CL0405