Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0272 ATGACGAGGAAGTGCCGAAAAATTGAGCAGATTAACGCTGCAATGGAGATGGCTAGGGTGGGTATGATCTCCGGCGCTCGGGCTGCCTTAGCTGTTGGAACTGCAACTTCATCTGCAACGACAAGAAAGAGGAGGAAGCTTAACAGTGACGAGCATCCCAAATTTTCTGCAGGATCATCCTTGGTTCAGCTTAAGAGTAGTAGTCCGGTCATCACTCCACCAGAAACGACGCTATTGCCGCCGGCGGAGCTAGAGGCACGCTGCAGCAGCCTTTACACCGATGAATTCCCAGACTCTTGTTGTTCCAGCAACGGATCAACTGAGCCAGACGAAGAGAGCATCGGTTTCTTAGATCTGGAGGTAGAGAGCGCTCAAGTTGAAACTTCGACGTGTAACTGCAGCGACGACGAAAGGAGAGACATGAGCCCTACGAGCGAGCTCCGAACCAAGTCAGAAGACGTGGAGTCGGCTGAGAAAACGAAGGAGAAGCTCGTAAGGGAGGTGAATTCCCACAGTAAATCCACGGGGAAAAATAGGCCAACAGAATTGGACCTGGAAGAATTCTTCGGTGCCGCCGAGAAAGACATTCAAAAACGGTTTGCGAAGAAGTATAATTATGATATTGGGAACGACGTGCCCCTGGAAGGACGCTACGAGTGGGTTAAGTTAAAGCCATAA 678 0.5029 MTRKCRKIEQINAAMEMARVGMISGARAALAVGTATSSATTRKRRKLNSDEHPKFSAGSSLVQLKSSSPVITPPETTLLPPAELEARCSSLYTDEFPDSCCSSNGSTEPDEESIGFLDLEVESAQVETSTCNCSDDERRDMSPTSELRTKSEDVESAEKTKEKLVREVNSHSKSTGKNRPTELDLEEFFGAAEKDIQKRFAKKYNYDIGNDVPLEGRYEWVKLKP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0272 225 MobiDBLite consensus disorder prediction 132 181 - -
Lele50g0272 225 Gene3D p27 158 225 IPR044898 -
Lele50g0272 225 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 3 224 IPR044275 GO:0004861|GO:0045736|GO:0051726
Lele50g0272 225 Coils Coil 147 174 - -
Lele50g0272 225 MobiDBLite consensus disorder prediction 53 73 - -
Lele50g0272 225 MobiDBLite consensus disorder prediction 127 181 - -
Lele50g0272 225 MobiDBLite consensus disorder prediction 34 77 - -
Lele50g0272 225 PIRSF CKI_KRP_plant 1 225 IPR044275 GO:0004861|GO:0045736|GO:0051726
Lele50g0272 225 Pfam Cyclin-dependent kinase inhibitor 180 223 IPR003175 GO:0004861|GO:0005634|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0272 Lele-ChrLele50 1610832 1612052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0272 180 225 Core Cell Cycle Gene Families AT1G49620 67.391 1.18e-17 76.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0262 49 1541702 1543917 Lele50g0272 50 1610832 1612052 ECH
Lele50g0272 50 1610832 1612052 Lele50g0272 50 1610832 1612052 ECH
Lele50g0272 50 1610832 1612052 Lele51g0272 51 1560251 1561504 hybridization
Lele50g0272 50 1610832 1612052 Lele52g0279 52 1664035 1665283 hybridization