Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0263 ATGCGTTGGTTACCTTCCCTTTCCTTTTCCCACTCTCACGGTCCCAAATCCTCCTCTGCCTCTTCTTCTTTTTCCACCTCCGACGTTGACCACCACAAGAAGAAGGCCGCCGATTCCACCCGCGGTTTTAGTGGCGTTTGGCCTTTTGGTCCCGGCAAAAAGACTAGCCATTCCAAGAAGCTCCGACCTATAGCCGACGTCGATGGCAAGTCCCCTCCCAGGGGGCATGATTCCTATGATGACGTCATTGTGCCTTCGGTTCATTCCCCGACCCCCCTTGATCGCCAGTTTAGTCGTTCCAATACAACTTCTTCCTTTTCCCCCTCCGTCGCGCCTCAACCCTTGCCCTTGCCGGACTCCGTGCTTTCTCGCCAGAGAGACGCCGATTGCCCTTTGCCTTCCCCAAAAGATGTGCCAGGACCCAGCAGCGCCACCAAAGGGGTCATGGAGCGCGATCGAGCTGATGGCGTGATGGCCGGTGTCTCTTCTGTTTTTCAAATTCGGAGTGTGTTTGCTAGCCCTGGCGTAGGAAAAAATAAGGGGCAAGATGAAAAAGGGTCATCAAGGATGGCGCGTCAGGATCAAAGTGGCAGTGAAAGTACTCGAGATAACTTTCGCATCAGCGTCTCAACTTGGAGTGCTCCAGTTAGTCCTCTGAGCAGTCCCTTGGTGAGCCCGAACAATGGAAGAAATAGTGATTTCGTTCAATATCATTACGTGTGCCCCCCGCCAAATCAATATTGGTCGGCACCAGAGATGGTCACTTCTGATGCATCAACAGGGACGACGCCACCTGCATTCTTTGATTTAACTGCATTATCCGCTGATACTTCTCCTCATTACAGTCCACGTGGCAGAAGTCCTAACCAAAATCTCAAAAGCCGAAGTGGAGCTACCTCACCAGTACGTCCCAGATTATCCCTCGAGACCGCAGTAGCTCGTCGTGATTTCAGTGCCCACTCTCTCAGTGTTCACCCCTTGCCATTGCCTCCTGGGGCACCCTTGCTTTCCCCTTCCCCTAAATTATCCCCAGTTTTGCCCAAGTTAGAGTCCTCCCCAATGAAAATCCAATGGCAGAAAGGGAAACTGATTGGGCGTGGTACATTTGGAAGTGTTTATGTTGCTACCAATAGAGAAACTGGTGCATTATGTGCGATGAAGGAAGTAGAAATATTTCCTGATGACCCCAAATCCGCTGAGTGTATAAAACAGTTAGAGCAGGAAATCAAAGTTCTTAGCCAGCTGAAACATACAAACATTGTGCAGTATTATGGCAGTGAAATCGTAAGCAATCTCCTTGTTGAAGATCGGTTTTATATTTATCTGGAGTACGTCTATCCTGGGTCAATAAATAAATATGTACGGGAACATTGTGGTGCCATAACAGAATCTGTTGTTCGAAATTTCACTCGTCATATTCTTTCAGGCTTGGCTTACTTGCATAGCAAGAAAACAATTCATAGGGACATCAAAGGGGCTAACTTGCTTGTTGATTCTACCGGGGTTGTTAAGCTTGCTGACTTTGGGATGGCCAAGCACCTTACTGGACATGCAGCTGATCTTTCTTTGAAGGGAAGTCCATACTGGATGGCTCCTGAGCTTATGCTGGCAGTGATGCAAAAAGACAACAGCTCCGATCTAGCTTTAGCTGTTGACATTTGGAGTTTGGGTTGTACAATCATAGAAATGCTCACAGGGAAGCCTCCTTGGAGCGAATACGAGGGAGCTGCGGCTTTGTTTAAGGTTACGAAGGATACCCCTCCTATACCTGAGACATTGTCACCGGAAGGTAAAGACTTCCTGAGGTGCTGCTTTAAGAGAAATCCAGCAGAGCGGTCACCTGCTTCAGCTTTACTTGAACATCGGTTCTTGAAAAATGCACAACAGCTTGTTGTTTCACATTCCATGCAGTCTCATAATGGAATAAATTTGATGGACAGACCCCTTAGTCCCACAGGGCGGCGTGAATATTTAACTGATCAGTTGCCAACTACCAGTGTGCAAATTGCAAGAGGGAAGGCCAATGATAGAGACTTGGACCCATTGCTGCAATATAGTTTACCTGGGTACTCGTGTAGAACATTGATCACGCCTGTTTTGTTGGCTACTGCCGTCACGTTTTCGCTTGAATCAATGTTCTCCAAATCCATTTTTGCCTCCCATTGCCCAGTTTTATTTCTTCTGTTCATCTTCGATGATCTGCTAGGGTACAACTTATTCAATCTTGATAATGCTGAATCCCGCCTAGCCTCAGCTGCGAGCTTCTTTGCCATGGAAGCAGAAACGTTCTGA 2292 0.4773 MRWLPSLSFSHSHGPKSSSASSSFSTSDVDHHKKKAADSTRGFSGVWPFGPGKKTSHSKKLRPIADVDGKSPPRGHDSYDDVIVPSVHSPTPLDRQFSRSNTTSSFSPSVAPQPLPLPDSVLSRQRDADCPLPSPKDVPGPSSATKGVMERDRADGVMAGVSSVFQIRSVFASPGVGKNKGQDEKGSSRMARQDQSGSESTRDNFRISVSTWSAPVSPLSSPLVSPNNGRNSDFVQYHYVCPPPNQYWSAPEMVTSDASTGTTPPAFFDLTALSADTSPHYSPRGRSPNQNLKSRSGATSPVRPRLSLETAVARRDFSAHSLSVHPLPLPPGAPLLSPSPKLSPVLPKLESSPMKIQWQKGKLIGRGTFGSVYVATNRETGALCAMKEVEIFPDDPKSAECIKQLEQEIKVLSQLKHTNIVQYYGSEIVSNLLVEDRFYIYLEYVYPGSINKYVREHCGAITESVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSTGVVKLADFGMAKHLTGHAADLSLKGSPYWMAPELMLAVMQKDNSSDLALAVDIWSLGCTIIEMLTGKPPWSEYEGAAALFKVTKDTPPIPETLSPEGKDFLRCCFKRNPAERSPASALLEHRFLKNAQQLVVSHSMQSHNGINLMDRPLSPTGRREYLTDQLPTTSVQIARGKANDRDLDPLLQYSLPGYSCRTLITPVLLATAVTFSLESMFSKSIFASHCPVLFLLFIFDDLLGYNLFNLDNAESRLASAASFFAMEAETF 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0263 763 Pfam Protein kinase domain 359 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0263 763 MobiDBLite consensus disorder prediction 91 110 - -
Lele50g0263 763 ProSitePatterns Protein kinases ATP-binding region signature. 364 387 IPR017441 GO:0005524
Lele50g0263 763 MobiDBLite consensus disorder prediction 275 305 - -
Lele50g0263 763 Gene3D Transferase(Phosphotransferase) domain 1 355 647 - -
Lele50g0263 763 SUPERFAMILY Protein kinase-like (PK-like) 357 665 IPR011009 -
Lele50g0263 763 MobiDBLite consensus disorder prediction 275 303 - -
Lele50g0263 763 MobiDBLite consensus disorder prediction 173 204 - -
Lele50g0263 763 MobiDBLite consensus disorder prediction 1 147 - -
Lele50g0263 763 FunFam Mitogen-activated protein kinase kinase kinase 5 355 661 - -
Lele50g0263 763 MobiDBLite consensus disorder prediction 10 26 - -
Lele50g0263 763 MobiDBLite consensus disorder prediction 59 77 - -
Lele50g0263 763 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 17 634 - -
Lele50g0263 763 SMART serkin_6 358 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0263 763 ProSiteProfiles Protein kinase domain profile. 358 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0263 Lele-ChrLele50 1537487 1542651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0263 195 663 MAP Kinase Kinase Kinase AT5G66850 61.323 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele50g0263 Pkinase 2.6e-64 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0263 50 1537487 1542651 Lele51g0261 51 1493101 1496905 hybridization
Lele50g0263 50 1537487 1542651 Lele52g0269 52 1576715 1581907 hybridization