Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0262 ATGTCATCATCGAATTCTCCGTGCGCTGCGTGCAAGTGTTTGAGGCGGAAATGCACGCAAGAATGCGTGTTCGCACCATACTTCCCACCGGACAATCCTCAGCGGTTCACTTACGTCCACAGGGTATTCGGGGCCAGCAATGTCGCAAAGCTTCTCAACGAGCTCAACGCCGCGCAGAGAGACGACGCCGTCAAGTCTCTGGCTTACGAAGCCGAGGCCCGTCTCCGTGACCCCGTTTATGGTTGTGTGGGTCTCATCTCCATCCTTCAGCACAGGCTGAGGCAGATCCAAGTGGAACTCAACAATGCCAAGAAGGAACTCGCCACGTACATTGGACCTCAGGCTCTTCAGGCGATGCCGCCTCCCACCATTCTAGCACCTTCCGGAATTATCCCACAACATCACCCGAACAACCCATATTCTTCCATAGCCGGTTATCCCTACAACAACATGCCACCGCCTGCGCCTATGACCAATATTCCGACCGGTGGCTCTTCTCATAGCGGCCAACTGGTGATTCGTGACCCTTCCCAACAGCATCAGATCTTGGACGCGCAGCAGTTGGCCGCCGCCGTGGCGGCGAGAGAGCAGCAAGATATGTTTCGAGGTTATGAACAGCAGCAACAGCAACAAGAGTTTCTGAGATTCAATGGCGGATACGATGTGGGTTCGGTTTCTGAGAGTGGATTCAATAATCATATTTCTTCAACCGCTGCTACCACCGAGATGTCTCCTTCCTTGGCTCTTGGCTCCTTCGACAGCCCTTACGGCGGCCAGATGCAACCGCCGCAAGCGGAACACCACCAGCAGCTTCAAGCTCAGCTAATGCTTTCCCCACAGCAGCCGCAACCACAGCAACAAAGCCAGCAGTCACAGCAACCCCACCACCAGCAGCAACAGTCAGAAAGCGAGGAGGGTAGGAGTGGCATCTGCCTTTCTTGTTGA 945 0.5481 MSSSNSPCAACKCLRRKCTQECVFAPYFPPDNPQRFTYVHRVFGASNVAKLLNELNAAQRDDAVKSLAYEAEARLRDPVYGCVGLISILQHRLRQIQVELNNAKKELATYIGPQALQAMPPPTILAPSGIIPQHHPNNPYSSIAGYPYNNMPPPAPMTNIPTGGSSHSGQLVIRDPSQQHQILDAQQLAAAVAAREQQDMFRGYEQQQQQQEFLRFNGGYDVGSVSESGFNNHISSTAATTEMSPSLALGSFDSPYGGQMQPPQAEHHQQLQAQLMLSPQQPQPQQQSQQSQQPHHQQQQSESEEGRSGICLSC 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0262 314 MobiDBLite consensus disorder prediction 263 308 - -
Lele50g0262 314 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Lele50g0262 314 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 300 - -
Lele50g0262 314 Coils Coil 86 106 - -
Lele50g0262 314 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Lele50g0262 314 MobiDBLite consensus disorder prediction 239 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0262 Lele-ChrLele50 1529647 1530591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0262 1 255 AS2 family AT5G66870 54.478 3.71e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele50g0262 LOB 1.1e-40 No_clan