Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele50g0261 | ATGGACTTGAGCTTGGATTTGAGTTTGTCTTTTGTTCCCAGAACCATTTCTGCGTTTCTTAGTGAGGTCTCTAAAACCGGAGATAGGCACGAGAAATTAGCGATGCTTGACGACTTTGTCAAGAGATTGGAGGATGAAATGAGTAAGATCGAAGCCTTCAAACGCGAGCTTCCCCTCTGCATGTTGCTCGTAAACGATGCTATAACGAGGTTGAAGGAGGAGAAAGTACGGTTCGTGGAAGTGCTAGATCGACCTGAGATTGAAGAATTCATACCATTGAAAGCCAATTCTGGAGAAAACCGACCATTAGCTATGGAAAAGGAAAGCTGTAACAAGAAGAACTGGATGACCTCTGCTCAACTGTGGAGCGCTGAAACCAAATTGGGAAGTGAAAATGATCGGTCTGTGCCGGAGAACCTAATTCAGTCACGAAATCTGAAAAACAGAGGAGGGGCATTTATCCCCTTCAATGGAAATTTGGGTATGTCAAAGCCAGTGACGAAGGAAGATAACGAACTCTCACAAGTTCCTAGTCTTAGCTTGATGACTCCAGCGTCTGAACTGAATCTCAAGAATTCAAAAACTTGTAGCAGAAATTGTTCCGGTGCTTCCTTCCTTACAAGCCGGCTTGACGGACAAGTCCAACCACAACCTCAACATTTGCATCAAAATCCTAGAAAACAAAGGCGATGCTGGTCTCCGGAGCTTCACCGACGATTTGTTGATGCGCTTCAACAACTGGGAGGAGCTCAAGTGGCCACCCCAAAACAGATTAGAGAATTAATGCAGGTGGAAGGCCTAACAAATGATGAAGTGAAAAGCCATTTGCAAAAATACAGGCTTCATGTGAGAAGACTTCCATCTTCAACAATTAACCAAGGAAATGGCTTGTGGATGGTAGAAGATCAATGTGGAGAAAAGTCAAAAGTAAACTTATCGCAGTCTGGTTCTCCCCAAGGACCTCTCTTACTTGCAGGTTCTGCAAAGGGTCTATCGAGTTCTGGAGATGGCGAAGAAGATGAGAAATCAGATTGCCATAGTTGGAAAGGTGGCCTGCACCAGCAAGCAGAAGCTGATAATGTACTTATTGAATATTGTGCAAATGTTGGCACTAGGGATCCACCTGCAAAAGAACTTTTTCAGTTATGGTCAACAGGGACCTCTTTAATTAATCCCCCAAGGCTGACAAACCGGAGGTCGCCGGTGAAGTTGGCGTATAGGGGGTCTGACTTCATCCCGAGCAAGGCTGCATCTTTGCCGCCAAAAACCGTGAAGTATGCGGATGTGTTGCTGGGGCATGCTGGGGATCCCCATGGCGATCCAGTCTTCAATAATCACGATCTTAACATGGATGTGCTTTACCAAGCTGGTGAAACTCAACAGGGCATCCTTATGTATACTCCTCGCTTAGTTTCAATAAACATGAAAGGATCCCTTGGATCTATGAGTTCACGTGGTACATTGTATAATGATGATGCGCCTATAGCATCAGATGTTGTCACTTGGGATTTCTTTGCTCGGCAGGGGGAAGAAATCAGTGACAGGCTTCATTTTTTGTTGAAGAGTGTGACCATATGCAGGTCCTTTCCATGTGGGATTCAGTTCATTGTTGATGATTCAGGAGGTTTCTCTGCTGTTGCTGTGGAGTTTCTAGAGAACCTTGTAGATGACTATACTAACACTCCTGTAATGCTATATGCTACCCGAAGTCCAGGTTCAAGCACAAGGCTTCGGAGCAGGAAGCATACAATCTCAGGGGATCTTCATGATGCTATATCATTTTCAAGATTGTCATCCTACTCTAAACTTATTGTGCCAGTTGGTCTGCCCATCTTAAGTACCACCGGTCATCGGGCATCAGTTTCTGAAGTAAAAGATATGATTCACGCTGCTTTTGAACGTTCCAATAAGAGGCCAATGTTCTGTCGTCTATCTGCTGCTCTTTGTCCCCTCCCTATCCCCTTGCCTTTTCCATCTATATTTGGGAACCTTGTTGGCCAGTGTGGTGAACTGATTAGTGGTCAGGTGACTGATGCATCAAGGAAAGATTGCAGAACCTACGCCGGTTTGGAATCGAACGAGGAGCACTTGGAGCGCAGTTACTTAGCAGCTGGGGCTTTGGAAAGGAAGAATTGGTGGAAATGGAAGAGATTTTGTCTAAAATGATCCCAAGCTTTGCTCAAACCCTTTAGCAATTCCCATTTTTCAGCCTCCCTAGCAAAAGACGGCCCCAGTTCCAGGATAAAGGCCCTGATCCAATCCACAACCTCCATGGCCATCTTCCTTGACAAGACCTATCAGATGCCACAGAAGAAGACAAAACCTGTTGAGCCCGGCCTTTCGAAAAGTCTTCTACGGGACCAAAAAACGAATGAGAGCAAATCTGATAGCCCAGGCCAAGGTCTTGGATTTGACATGCTGCCGAATGCCAATTATATAAGCACGCCTACAGTTATAACTCGTTTTTTCCTCAATAATTCAGAGTTCACAGCATAA | 2496 | 0.4503 | MDLSLDLSLSFVPRTISAFLSEVSKTGDRHEKLAMLDDFVKRLEDEMSKIEAFKRELPLCMLLVNDAITRLKEEKVRFVEVLDRPEIEEFIPLKANSGENRPLAMEKESCNKKNWMTSAQLWSAETKLGSENDRSVPENLIQSRNLKNRGGAFIPFNGNLGMSKPVTKEDNELSQVPSLSLMTPASELNLKNSKTCSRNCSGASFLTSRLDGQVQPQPQHLHQNPRKQRRCWSPELHRRFVDALQQLGGAQVATPKQIRELMQVEGLTNDEVKSHLQKYRLHVRRLPSSTINQGNGLWMVEDQCGEKSKVNLSQSGSPQGPLLLAGSAKGLSSSGDGEEDEKSDCHSWKGGLHQQAEADNVLIEYCANVGTRDPPAKELFQLWSTGTSLINPPRLTNRRSPVKLAYRGSDFIPSKAASLPPKTVKYADVLLGHAGDPHGDPVFNNHDLNMDVLYQAGETQQGILMYTPRLVSINMKGSLGSMSSRGTLYNDDAPIASDVVTWDFFARQGEEISDRLHFLLKSVTICRSFPCGIQFIVDDSGGFSAVAVEFLENLVDDYTNTPVMLYATRSPGSSTRLRSRKHTISGDLHDAISFSRLSSYSKLIVPVGLPILSTTGHRASVSEVKDMIHAAFERSNKRPMFCRLSAALCPLPIPLPFPSIFGNLVGQCGELISGQVTDASRKDCRTYAGLESNEEHLERSYLAAGALERKNWWKWKRFCLKXSQALLKPFSNSHFSASLAKDGPSSRIKALIQSTTSMAIFLDKTYQMPQKKTKPVEPGLSKSLLRDQKTNESKSDSPGQGLGFDMLPNANYISTPTVITRFFLNNSEFTA | 831 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele50g0261 | 831 | MobiDBLite | consensus disorder prediction | 334 | 348 | - | - | |
Lele50g0261 | 831 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 227 | 282 | IPR006447 | GO:0003677 | |
Lele50g0261 | 831 | Gene3D | - | 226 | 283 | - | - | |
Lele50g0261 | 831 | SUPERFAMILY | Tubulin nucleotide-binding domain-like | 431 | 610 | IPR036525 | - | |
Lele50g0261 | 831 | Pfam | Misato Segment II tubulin-like domain | 446 | 503 | IPR019605 | - | |
Lele50g0261 | 831 | Pfam | Myb-like DNA-binding domain | 229 | 280 | IPR001005 | - | |
Lele50g0261 | 831 | MobiDBLite | consensus disorder prediction | 309 | 351 | - | - | |
Lele50g0261 | 831 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 224 | 284 | IPR017930 | - | |
Lele50g0261 | 831 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 8 | 349 | IPR044787 | GO:0003700|GO:0006355 | |
Lele50g0261 | 831 | Coils | Coil | 36 | 56 | - | - | |
Lele50g0261 | 831 | MobiDBLite | consensus disorder prediction | 771 | 802 | - | - | |
Lele50g0261 | 831 | SUPERFAMILY | Homeodomain-like | 225 | 285 | IPR009057 | - | |
Lele50g0261 | 831 | FunFam | Myb family transcription factor | 226 | 284 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele50g0261 | Lele-ChrLele50 | 1515896 | 1529110 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele50g0261 | 1 | 277 | G2-like Transcription Factor Family | AT4G37180 | 42.403 | 6.22e-59 | 200 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Lele50g0261 | Misat_Tub_SegII | 2.3e-10 | CL0566 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele54g0110 | 54 | 881742 | 889281 | Lele50g0261 | 50 | 1515896 | 1529110 | CCT | |
Lele55g1377 | 55 | 20207165 | 20208892 | Lele50g0261 | 50 | 1515896 | 1529110 | CCT | |
Lele56g1322 | 56 | 16492798 | 16503171 | Lele50g0261 | 50 | 1515896 | 1529110 | CCT | |
Lele50g0261 | 50 | 1515896 | 1529110 | Lele51g0258 | 51 | 1465097 | 1470995 | hybridization | |
Lele50g0261 | 50 | 1515896 | 1529110 | Lele52g0266 | 52 | 1549683 | 1551274 | hybridization |