Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0253 ATGGAAGAAATGGTTATAGAACTTGTACTTGGCGAACTGCTGAGCAAGGTTTTGGAGGCGAAGGTCAGGGCAATTCAATTCAGACCCACCCTTGAACGCCTAGCTAGCACACTCACGTCAATAAAACCAGTGATCGAACAGATAAAACAATACAACATGCAACTAGATCGGTCGGAGGATGAAACAGAGAAGTTAATTGAAGATGTGAAGAATGGCGAGAAGCTTGTTCTCAAGTGCTCAAAACTCCGGTGGTGGGAATGCTGCTATAAACCCCAATACCAGGAGCAACTTGAAGATTTGGATCAGTCACTCGTGAGATTCTTTCAAGTTGATATGCAAGTTCAGAAGGCGAGGGATGCGAAGGAGACGCTGATAGAGGTGAAAGGTATTCATATGGAGATTAAGAAACTGAATGCGGTTGGGAGACATGAGAGGGGCCTGTGCTCAGCTCCCGAGCCGCCTGCATTCACTGTTGGATTGGATCTTCATGTTAGGGAAGTGAAGATCCGGCTTCTCCAGGATGATGTTTCAGTGATAGTGGTCACCGGCTCGCCAGGTTCTGGGAAGACCACTTTGGCCAAAAAGTTCTGTTGGGATGCTAATGTCAGAGGTAAATTCAACGACAATATCTTCTTTGTCAAGTTCTCGGAGACCCCAAATTTGAAACAAATTGGGGAAAATCCTACACTGTTGGTTCTGGACGATGTTTGGGATAGAGCAGAATCTCTTGTTGACAATTTTCTGATGCAGCTGCCAGACTTTAAGATTTTAGTGACTTCCAGATTTGCAATTCAAAGATTCGGCACTCCACATTACTTGACGCCCCTTGATGATGAGGATGCCGTGAAGCTTTTCCGCCACTCAGCACAACTGAAGAAGAGCAGCTCTGATATTCCTGATCTTATTGTGAGACAGATAGTCCACGGCTGCAGTGGTTCTCCAATGGTACTAAATGCGATTGGCAGGTCACTCTGTGGGCAGCATTCTGTGGTATGGCAAAGCAGGGCAACGGAATTGTCTAAGGGTCGTCCGATTTTTGAATCTAATGAGGATCTGCTTGATTTTCTCCAAAAAAGCTTCGATGTCTTAGATACTAAGTCAGTCATTAAGGAGCGTTTCATGGACCTAGGTTTATTTCCTGAAGACCAAAAGATTCCTGCAGCTTCTCTTGTTGATATGTGGGTGGAACTGCATGGAGAAGATGACATAATTGCAATGGAGAAAATTTATGAACTGGCCACCCGTAACATGGTTGATATTGTCATAAGGTTTGCAAGTGGCACATGGAACTTCAATAGCCACTTTGTCATGCGGCATGATCTTTTTCGGGAGCTAGCTATCCATCGAAGGCAAATTAGCCACGAGCCACTGGAAAAGAGGAAAAGACTGATTATTAACATAACTGGAAACGAACTTCCCCAGTGGTGGACTGAACAAAAAGAGTATCATATAGCCGCCCGCGTCTTATCCATATCAACTGATGAATTATTCTCTTCTGATTGGTGTAACTTGGTACCAACTGAAGTTGAGGCTCTAATTTTGAACCTTCGAGGGAAGAAGTACACCATACCAAGGTTCATAGAGAAAATGAGTAAACTAAAAGTTATTTTAATCACAAATTATGGTTTCCACCCTGCTGCTGAGTTAGAGAATTTAGAACTGCTTAATTTCTTGCCCAATCTTAAAAGAATTAGACTGGAGCGTGTATTAATTCCTTCCCTCATTGAGAACGGAATGCAGTTGAAGAATCTTCAGAAACTATCTCTGTTTATGTGCAACGTAAATGAAGCTTTCGAAAATCTTTCCATCCAAGTTTCAGATATGATGCCAAAATTGGTGGAACTGAACATTGACTACTGCAATATGGTGGAATTGCCAGTTGGGTTGTGTGGTATTGTCTTCTTAAAGAAGTTGAGTATTACCAGTTGCCACAAGCTTTCTGCACTTCCTGAAGAAATTGAGAAGTTGGTCAATTTGGAATTGCTAAGGGTTAGTTCTTGTTCTGATTTAGCAGAGTTTCCGGACTCAGTTTCCAGCCTTAAAAAGCTCAAATTTCTTGATATCTCTTACTGCGTAAGCCTTAGTAAATTGCCAGATCATATGGGTGAGTTACTTAATTTGGAAGAGCTCTACATCACACGTTGCTTGAGATTATGGAAGTTGCCACCCACAATCATTAACCTTACGGCCCTAAGAGTTGTGGTGTGTGACGAAGAGATGGCTAATTTATGGGAACCTTGCCAAACCATCCTTACTGATCTACACGTAGAAGTGCCCCAAGCTGATATAGGCCTAGAATGGCTTTGA 2307 0.427 MEEMVIELVLGELLSKVLEAKVRAIQFRPTLERLASTLTSIKPVIEQIKQYNMQLDRSEDETEKLIEDVKNGEKLVLKCSKLRWWECCYKPQYQEQLEDLDQSLVRFFQVDMQVQKARDAKETLIEVKGIHMEIKKLNAVGRHERGLCSAPEPPAFTVGLDLHVREVKIRLLQDDVSVIVVTGSPGSGKTTLAKKFCWDANVRGKFNDNIFFVKFSETPNLKQIGENPTLLVLDDVWDRAESLVDNFLMQLPDFKILVTSRFAIQRFGTPHYLTPLDDEDAVKLFRHSAQLKKSSSDIPDLIVRQIVHGCSGSPMVLNAIGRSLCGQHSVVWQSRATELSKGRPIFESNEDLLDFLQKSFDVLDTKSVIKERFMDLGLFPEDQKIPAASLVDMWVELHGEDDIIAMEKIYELATRNMVDIVIRFASGTWNFNSHFVMRHDLFRELAIHRRQISHEPLEKRKRLIINITGNELPQWWTEQKEYHIAARVLSISTDELFSSDWCNLVPTEVEALILNLRGKKYTIPRFIEKMSKLKVILITNYGFHPAAELENLELLNFLPNLKRIRLERVLIPSLIENGMQLKNLQKLSLFMCNVNEAFENLSIQVSDMMPKLVELNIDYCNMVELPVGLCGIVFLKKLSITSCHKLSALPEEIEKLVNLELLRVSSCSDLAEFPDSVSSLKKLKFLDISYCVSLSKLPDHMGELLNLEELYITRCLRLWKLPPTIINLTALRVVVCDEEMANLWEPCQTILTDLHVEVPQADIGLEWL 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0253 768 Gene3D - 360 449 IPR036388 -
Lele50g0253 768 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 226 768 IPR039203 GO:0050832
Lele50g0253 768 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 5 135 IPR008808 -
Lele50g0253 768 SUPERFAMILY RNI-like 519 734 - -
Lele50g0253 768 PRINTS Disease resistance protein signature 678 694 - -
Lele50g0253 768 PRINTS Disease resistance protein signature 178 193 - -
Lele50g0253 768 PRINTS Disease resistance protein signature 310 324 - -
Lele50g0253 768 Gene3D - 145 227 IPR027417 -
Lele50g0253 768 Pfam NB-ARC domain 229 339 IPR002182 GO:0043531
Lele50g0253 768 Pfam NB-ARC domain 163 224 IPR002182 GO:0043531
Lele50g0253 768 Gene3D - 275 359 IPR042197 -
Lele50g0253 768 Gene3D Ribonuclease Inhibitor 473 751 IPR032675 -
Lele50g0253 768 CDD AAA 158 269 - -
Lele50g0253 768 ProSiteProfiles RPW8 domain profile. 1 146 IPR008808 -
Lele50g0253 768 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 374 IPR027417 -
Lele50g0253 768 Coils Coil 48 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0253 Lele-ChrLele50 1477336 1480703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0253 558 731 WRKY Transcription Factor Family AT4G12020 28.351 2.20e-07 52.8