Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0242 ATGTCATTTTCTCTGTTCTCGACGCCACAGCAACAACCGCTGTTTCAGCCCCCGCAGCAGCAACAGCAGAGCAGTTTGTTCCTTCCACAGCAGCAGCAGCATCAAGCGCAATTGCAACTCCAACAGCAGCCGCAGCCGCAGCAACAGCAGCTGCAACTGTTTCTGTTCACTACCGATAAAACTCCCGCTAATTATAGTACCAAGTGGGCAGATCTTCACCCTGATTCCCAGAAGGTTCTCCTTCAGATCGAGGAGCGGATATTGGAGTATAGGGATGAGAGCCAGAGACTGGATCAGTGTGGTCGTCTTTATGATTCGTCAGTTTCAAACGAAGGGTTTGAGCTTGATGCAAGCCACATCGTTCAGGAACTGGGGGGAATCAGCACTGCCATGGAACGACAGAAAACTTTGTTGCAGGAATTGATGTTTGTTGTTAAAGATATGTTACGCAACACAGAGGTTGCTATTCGTTCTTTTATGATGTTACGTCCAAGGTTCCTTCATCCTAGTGGAGGGGGTGCTTCAAGTGCCACAGCCCCTTTGCAGACTCCTGGAACCACTGTAACACCTAGTTCAAGTAGTCAACCAATAACTACAACGCTAGTGCCTGTTTTTGATTTTTATTATGGGCTTCCAAAGAAACCCTCACCCTTTTTGCAGCAATCAGTCTTAAGATTTGAGAAGCATCTGGGTGAATGCCGTCAATGGATTGAAGAGTTGGAACAGTTTCTTCTTTTAGACTCTGAGAACAACGGTTCTAATAATAGATCCTCATTATTGCAATCTCTTCCCAAAGTCATGACAAATGTGCATGATTTTTTTGTTCACGTGGCTGCAAAGGCGGAAAGTATTCATCAGTACATTGAATCTATGAAATCAGCTTACCTAGCTGATCAGCGTCGTTGGGGGGAGGTGAATGATCCATTTTTAGAGGCTGATCGGCGAGAAACAGCAAGACATGAAGCTGCCTCAAAAAGAGTTCATCCAACACTACACTTGCCTGCAAATTCACAACCATCAACGCAAGTTGCTGGGTTGTTTTCCAGCTCAGGAACTCAAGGGACGTTGACTGCTTCACAGACATCTGCAGCAACCACGTCATCTTCATTGGGAAGTGGCCTTTCACTTTTTAGCACACCATCATCTGTTCCGCCTTCCTCTACACCATCTTTGTTTACAACACCGACTTCTGCTCCAACATCCTCTTTGTTTGGTTCTAGTGCTACACCGCAAGCGTCAGCGTTTGGTTCATCATCTCCCTTATTTGCTCCTTCTTCCACTCCCTCTCTTTTCAGTAATTCTGCTTCACCATTTGGTACAAGTACTGGAGGTTCACTCTTTTCGACTCCATTTGCTTCAGGTGCCGCAACAGGATCAGGGGCAAGCTTTGGGGCTGCATCAAAATCATCAAGGCCAAAATCCAGAACTGCTCGACGATAA 1440 0.4611 MSFSLFSTPQQQPLFQPPQQQQQSSLFLPQQQQHQAQLQLQQQPQPQQQQLQLFLFTTDKTPANYSTKWADLHPDSQKVLLQIEERILEYRDESQRLDQCGRLYDSSVSNEGFELDASHIVQELGGISTAMERQKTLLQELMFVVKDMLRNTEVAIRSFMMLRPRFLHPSGGGASSATAPLQTPGTTVTPSSSSQPITTTLVPVFDFYYGLPKKPSPFLQQSVLRFEKHLGECRQWIEELEQFLLLDSENNGSNNRSSLLQSLPKVMTNVHDFFVHVAAKAESIHQYIESMKSAYLADQRRWGEVNDPFLEADRRETARHEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGTLTASQTSAATTSSSLGSGLSLFSTPSSVPPSSTPSLFTTPTSAPTSSLFGSSATPQASAFGSSSPLFAPSSTPSLFSNSASPFGTSTGGSLFSTPFASGAATGSGASFGAASKSSRPKSRTARR 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0242 479 MobiDBLite consensus disorder prediction 171 196 - -
Lele50g0242 479 Gene3D - 214 304 - -
Lele50g0242 479 MobiDBLite consensus disorder prediction 175 196 - -
Lele50g0242 479 MobiDBLite consensus disorder prediction 331 360 - -
Lele50g0242 479 MobiDBLite consensus disorder prediction 315 360 - -
Lele50g0242 479 MobiDBLite consensus disorder prediction 455 471 - -
Lele50g0242 479 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 4 467 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Lele50g0242 479 MobiDBLite consensus disorder prediction 1 25 - -
Lele50g0242 479 MobiDBLite consensus disorder prediction 376 409 - -
Lele50g0242 479 MobiDBLite consensus disorder prediction 455 479 - -
Lele50g0242 479 Pfam Nucleoporin FG repeated region 215 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0242 Lele-ChrLele50 1438040 1441284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0242 53 479 NAC Transcription Factor Family AT4G37130 64.516 0.0 520